Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele46g0907 | ATGGTACAAAGAATTGGGACTCGACTCTTTGTGAGCAGATTATCATTCTTCACAACAGAGAGCTACCTCATAAATCTGTTTTCTCCATTCGGAAGAATTACGGAAGCTAGTCTAGTGAAGGACCCAAAAACTCAAAGGCCCAAAGGTTTTGGGTTTGTCTCCTATGAGTCAGAAATTGAAGCAGAGAAAGCTATGAACACCATGAATGGCAGGATAATTGATGGAAGGCTGATTTTCGTAGAACCTGCAAAAGCTACAAGACCTAAAGAAGATGGTGCTTCCTAA | 285 | 0.4105 | MVQRIGTRLFVSRLSFFTTESYLINLFSPFGRITEASLVKDPKTQRPKGFGFVSYESEIEAEKAMNTMNGRIIDGRLIFVEPAKATRPKEDGAS | 94 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele46g0907 | 94 | FunFam | RNA-binding (RRM/RBD/RNP motifs) family protein | 2 | 88 | - | - | |
Lele46g0907 | 94 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 7 | 85 | IPR000504 | GO:0003723 | |
Lele46g0907 | 94 | SMART | rrm1_1 | 8 | 81 | IPR000504 | GO:0003723 | |
Lele46g0907 | 94 | SUPERFAMILY | RNA-binding domain, RBD | 6 | 88 | IPR035979 | GO:0003676 | |
Lele46g0907 | 94 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 8 | 85 | - | - | |
Lele46g0907 | 94 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 9 | 78 | IPR000504 | GO:0003723 | |
Lele46g0907 | 94 | Gene3D | - | 3 | 93 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele46g0907 | Lele-ChrLele46 | 16755463 | 16756836 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele46g0907 | 6 | 90 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 36.471 | 2.09e-11 | 56.6 |