Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0894 ATGGCGAGAATTAAGGTTCATGAACTGAGGCAGAAGACGAAGGCCGATCTGCTCAACCAGCTCAAGGAGCTTAAGGCTGAGCTTGCTTTGCTCAGAGTTGCAAAAGTGACTGGCGGTGCACCGAACAAACTTTCCAAGATTAAGGTGGTGAGGTTGTCCATAGCTCAGGTGTTGACGGTTATATCTCAGAAGCAGAAGGCTGCGTTGAGGGAGGTATACAAGAATAAGAAGTATTTGCCTCTTGATCTGCGTCCTAAGAAGACTAGGGCTATCCGTAGAAGGCTTACTAAGCACCAGATTGGAAATGGAGGTGAAGGAGGAGGGATATATGAAAACCTTTCACATGTTTGGGAAAGGGAAATGGAGGAATTTGATTGA 378 0.4603 MARIKVHELRQKTKADLLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQIGNGGEGGGIYENLSHVWEREMEEFD 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0894 125 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lele46g0894 125 PANTHER 60S RIBOSOMAL PROTEIN L35 1 99 IPR045059 GO:0000463|GO:0022625
Lele46g0894 125 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele46g0894 125 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele46g0894 125 Coils Coil 7 34 - -
Lele46g0894 125 Gene3D - 78 123 - -
Lele46g0894 125 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Lele46g0894 125 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Lele46g0894 125 CDD Ribosomal_L29_HIP 8 64 - -
Lele46g0894 125 FunFam 60S ribosomal protein L35 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0894 Lele-ChrLele46 16517270 16519349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0894 1 99 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 90.909 6.80e-58 173