Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0893 ATGATAGAAGAACTTACTCTTGAAGAGCCAGGAAAGAAGAGTAAAGCAGGAGAAGAGGAACGAGAGGTGCAGCTTATGATCGAATTTCCCAGGAAGACAACAATATGCAGTCGGATATATGGGAGAATACCGGTCATATCAATCAATAAATTTGTTTCTCTGATATTCTTTGGCGATGAGGCTGATGATGGTCCTGGATCCCTTAGGGAAGGATGTCGTAGAAAGGAGCCACTCTGGATTGTTTTTGAAGTCTCGGGTACAATTAATCTTTCATCATACTTGAGTGTGTCATCTTACAAGACAATAGATGGCCGAGGCCAGAGCATAAAGCTCACAGGAAAGGGCTTAAGGCTGAAAGAATGTGAGAATATAATTGTATGCAACCTTAAGTTTGAAGGTGGTAGGGGTCATGATGTTGATGGCATTCAAATAAAACCAAACTCTAGGAACATATGGATTGACCGCTGCAGTCTTCGTGATTATGATGACGGGCTTATAGACATTACAAGACAAAGCACAGATATTACTGTATCTAGATGTTACTTTGCACAGCATGATAAGACAATGCTAATTGGAGCTGACCCAACTCACATCGGCGATAGATGCATCCGGGTGACAATTCATCACTGCTTCTTTGATGGGACACGACAAAGACAACCTCGTGTTAGATTTGGAAAAGTTCATCTGTACAACAATTACACCAGAAACTGGGCTATATATGCTGTTTGTGCTAGTGTCGAGTCCCAGGCTATTGGTATTATTCATGTAAATAATGATTTGAAAACATTCTACAGATATACTCTCAGTGCAATATTTATGAAGCAGACACTAAGAAAAAGACTTTTGAATTCTATACGGAGAAGAAAATATTACTCTAGTTCAAAATTATTGAGGGAGCTGGGACTTGGTGCAGCGGTTATGTCAAGTGTCAACCTAGCTGTTTTCTTTGTGAATCATGTCCAACCTTAA 969 0.3994 MIEELTLEEPGKKSKAGEEEREVQLMIEFPRKTTICSRIYGRIPVISINKFVSLIFFGDEADDGPGSLREGCRRKEPLWIVFEVSGTINLSSYLSVSSYKTIDGRGQSIKLTGKGLRLKECENIIVCNLKFEGGRGHDVDGIQIKPNSRNIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPTHIGDRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWAIYAVCASVESQAIGIIHVNNDLKTFYRYTLSAIFMKQTLRKRLLNSIRRRKYYSSSKLLRELGLGAAVMSSVNLAVFFVNHVQP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0893 322 Gene3D - 50 267 IPR012334 -
Lele46g0893 322 SUPERFAMILY Pectin lyase-like 63 258 IPR011050 -
Lele46g0893 322 SMART amb_all 85 258 IPR002022 -
Lele46g0893 322 PRINTS Pollen allergen Amb family signature 218 237 IPR018082 -
Lele46g0893 322 PRINTS Pollen allergen Amb family signature 57 82 IPR018082 -
Lele46g0893 322 Pfam Pectate lyase 94 241 IPR002022 -
Lele46g0893 322 PANTHER PECTATE LYASE 18-RELATED 63 249 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0893 Lele-ChrLele46 16509728 16512643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0893 62 284 Polysaccharide Lyase AT3G55140 80.088 1.97e-130 372