Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0888 ATGTCTTCTAGCATGGTTGCAGGGCCTGAGAGTTCAGATACGACGTCTTATCTAAGCTCCATTGAGCTCAACAGTTTCGCGAGTCTTCCCACTACTGATAATCATCATCAGTCTCCCACTCTTGGTCAACTTCTCAAGCATGTCGGAGATGTACGCAAGGAAGCAACTGGAGACGGCAGCGAGACGCCGCTGCATCATGCTCTTGACGTCGGAGCTGTTCATGCTGGACTTGAACCTCGTTCTCTTCCTTTTGTGCTGTCTTTTAGTAATCTAACTTACAACGTCAAGGTTCGCCGGAAAATGAACTTCTTGGCGTTGTGTTCGCGAGGGAGAAACCGTCTTGGTGCTGCTGCTGTTGATGATACCATGGGTGAAGAGAGCTTGTTCTCTAGTACAAAGACCCTTCTAGATGACATCTCGGGCGAGGCTCGCGACGGCGAGATCATGGCTGTGATGGGCGCTAGTGGTTCTGGCAAGTCTACGCTTATTGACGCCTTGGCTAACCGTATAGCAAAGGGAAGCTTAAAAGGAACGGTGGCTCTCAACGGCGAGGCTTTGAACTCCCGGATTCTTAAGACGATTTCAGCTTATGTAATGCAAGACGATCTGTTATTTCCGATGCTCACCGTCGAAGAGACTCTCATGTTCGCGGCGGAGTTCCGATTGCCTCGAACCCTTTCAAAATCCAAGAAGAAAATGCGAGTCCAAGCTCTGATAGACCAGCTCGGCCTCCGCAACGCCGCTAATACCGTCATCGGAGACGAAGGCCACCGTGGAGTATCCGGAGGCGAACGGCGGCGCGTGTCCATCGGCATTGACATAATCCACGACCCTATCATCCTCTTCCTCGACGAGCCTACTTCTGGACTTGACTCCACCAGCGCTTTCATGGTGGTGAAGGTTCTTCAGAGAATTGCTCAAACCGGAAGCATCGTGATCATGTCCATTCATCAACCTAGTTACAGAATCCTCGGACTCCTTGACAGAATGATCTTCCTGTCGCGTGGGAAAACAGTTTACAGTGGCTCTCCCATGCAGCTCCCGACCTTCTTCGCCGAGTTCGGCCACCCGATACCGGAAAACGAGAACCGAACCGAGTTCGCTCTCGATCTGATTCGTGAACTCGAACGCTCACCAGGTGGAACCAAGAGCTTATTTGAGTTCAACAAATCATGGCAGAACAAGAAGCATATTGAAAACTCAAGCTCTACTAATAACCTCAGTCCTGGACGGAGTTCATCTCTGAAAGAAGCGATCAGCGCGAGTATTTCTAAAGGGAAATTAGTTTCCGGCGCGACGAACACAAACACAAGCTCAAGTTTATTATCATCATCATCTTCATCTTCATTGATAGTTCCGACATATGCGAACCCGTTTTGGATCGAGCTGGTGACACTGTCGAAGCGATCCTTTACGAATTCTCGCCGGATGCCGGAGCTGTTAGCGATGAGACTCGGCACGGTTATGGTCACCGGATTCCTTCTCGCCACCGTGTTCTGGCATTTAGATAACTCTCCCAAAGGGATCCAAGAAAGACTCGGCTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACTGCCGACGCACTCCCGGTGTTCCTTCAAGAACGACACATCTTCATGAGAGAAACCTCCCACAACGCTTACCGGCGATCATCCTACCTCATCTCTCACGCTCTCGTCGCCTTCCCTCCATTAATCTTCCTCTCTTTAGCCTTCGCCGTCACCACCTTCTTCGCGGTTGGCCTCGACGGAGGCTTCTCCGGCTTCGCCTTCTACTTCGCCATCATCCTCGCCTCGTTCTGGGCCGGAAACTCCTTCGTCACCTTCCTCTCCGGCCTGGTTCCTCACGTGATGTTGGGCTACACCATCGTTGTCGCCATATTAGCCTACTTCTTACTCTTTAGTGGCTTCTTCATAAACAGAGACCGAATTCCGGCGTACTGGATATGGTTCCATTACATATCTCTGGTGAAATATCCATTTCAGGCGGTTCTTCAGAACGAATTCGGCGACCCGATGAAGTGCTTCGTGAAGGGGGTTCAGATCTTCGATAATACGCCGTTAGGGTCGGTGCCGGAGATGATGAAGGTGAAGCTATTGAAGAGCATGAGCGAAACTTTAGGCGTGAGCATAACGAGCTCAACATGCTTGACGACTGGTTCAGACATATTGCAACAATACGGAGTTTTGGATTTGAGCAAATGGAATTGCTTGTGGGTCACTGTGGCTTGGGGCTTCTTTTTTAGGATTTTGTTTTACTTCATGTTGTTGTTGGGAAGCAAGAACAAGAGAAGATAA 2304 0.5004 MSSSMVAGPESSDTTSYLSSIELNSFASLPTTDNHHQSPTLGQLLKHVGDVRKEATGDGSETPLHHALDVGAVHAGLEPRSLPFVLSFSNLTYNVKVRRKMNFLALCSRGRNRLGAAAVDDTMGEESLFSSTKTLLDDISGEARDGEIMAVMGASGSGKSTLIDALANRIAKGSLKGTVALNGEALNSRILKTISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKMRVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQTGSIVIMSIHQPSYRILGLLDRMIFLSRGKTVYSGSPMQLPTFFAEFGHPIPENENRTEFALDLIRELERSPGGTKSLFEFNKSWQNKKHIENSSSTNNLSPGRSSSLKEAISASISKGKLVSGATNTNTSSSLLSSSSSSSLIVPTYANPFWIELVTLSKRSFTNSRRMPELLAMRLGTVMVTGFLLATVFWHLDNSPKGIQERLGFFAFAMSTTFYTTADALPVFLQERHIFMRETSHNAYRRSSYLISHALVAFPPLIFLSLAFAVTTFFAVGLDGGFSGFAFYFAIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPAYWIWFHYISLVKYPFQAVLQNEFGDPMKCFVKGVQIFDNTPLGSVPEMMKVKLLKSMSETLGVSITSSTCLTTGSDILQQYGVLDLSKWNCLWVTVAWGFFFRILFYFMLLLGSKNKRR 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0888 767 Pfam ABC transporter 136 288 IPR003439 GO:0005524
Lele46g0888 767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 351 IPR027417 -
Lele46g0888 767 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 360 IPR003439 GO:0005524
Lele46g0888 767 SMART AAA_5 145 337 IPR003593 -
Lele46g0888 767 Pfam ABC-2 type transporter 317 395 IPR043926 GO:0140359
Lele46g0888 767 Gene3D - 127 351 IPR027417 -
Lele46g0888 767 Pfam ABC-2 type transporter 463 671 IPR013525 GO:0016020|GO:0140359
Lele46g0888 767 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524|GO:0016887
Lele46g0888 767 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 753 - -
Lele46g0888 767 FunFam ABC transporter G family member 6 125 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0888 Lele-ChrLele46 16381893 16384196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0888 135 320 Calmodulin-binding Proteins AT2G36910 29.630 1.41e-10 63.2