Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0871 ATGTCTCTCAGAAAACCTCCACTTCCTCGTCTCCTCCTCAACAACGTTTCCTGCATGAGAAATGCGCAACAAATTCTTCATCACGTGAATGTATCCCTTCATGATGGTGGTGCCCTCGTTTTAACAGGCGCAAATGGCTCTGGTAAGACAACTTTCCTGCGCATGTTAGCTGGATTTTCTCGTCCTTCAGCCGGTGAAGTCCTTTGGAATGGCCATGACATTACACAATCTGGAATATTTCATCAGTATAAGCTTCAGCTCAACTGGCTTTCCCTCAAGGATGCCATTAAAGAGAAGTTTACAGTTCTTGACAATGTTCAATGGTTTGAAGTTCTTGAAGGCAAGCAAGGTAGGTCCTTGCCTGCACTCGAGTTGATGGGTCTCGGAAGATTGGCTAATGAGAGGCCAAGTAGATTGTCAATGGGCCAGCGGAAAAGATTACAACTTGCCAGATTGTTGGCGATCGATCGTCCGATTTGGTTGCTCGATGAGCCTTCAGTTGCATTAGATGACGAAGGGGTGAAGTTGCTTGAGTACATAATTGCAGAACACAGAAAAAATGGTGGGATTGTGATTGTGGCAACTCATTTACCAATGAAGATTGAAGATGGCTTGGTCTTGAGGCTGCCTCCAAGATTTCCAAGGAGGTTGACTTTAGTGGATATGCTTGATCGTGCTGATATTTAG 687 0.4483 MSLRKPPLPRLLLNNVSCMRNAQQILHHVNVSLHDGGALVLTGANGSGKTTFLRMLAGFSRPSAGEVLWNGHDITQSGIFHQYKLQLNWLSLKDAIKEKFTVLDNVQWFEVLEGKQGRSLPALELMGLGRLANERPSRLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKNGGIVIVATHLPMKIEDGLVLRLPPRFPRRLTLVDMLDRADI 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0871 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
Lele46g0871 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Lele46g0871 228 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 203 IPR005895 GO:0017004|GO:0022857
Lele46g0871 228 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Lele46g0871 228 Gene3D - 8 207 IPR027417 -
Lele46g0871 228 SMART AAA_5 35 223 IPR003593 -
Lele46g0871 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 197 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0871 Lele-ChrLele46 15776979 15777665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0871 24 178 Calmodulin-binding Proteins AT2G36910 29.240 2.48e-12 63.9