Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0856 ATGAGAATGAGTTGGCATCATTGTGGAGCAATGCATTTTATCAAATTAAACCCTGCACTTTCGCATTCTCTGAGTAATTTTTCCAGATCCTTTCTTGCACTGTTATCTACTGTTGTTTCTCCCCAAACTCAAGCAACCTCAGCGGAACGCATTTCCATCATCGATTACCTAAACGCCAACTTCAAATTCTCCAAAGCTCAATCCATCTATGTCCCCAAACGACTTTCTCAGGTTAGGTGCCCTCAACATCCCTTGTCCGTGGTTAATTATTTTAAACAGATTGGGTTTTCTGAATCACAGATTAGCTCTTTGCTTGGTAACCAACCTCAAATATTGTTCTCACGGTTTGAAACCTTGAAGCCGAAAATTGAGTACCTTCAGCTTCAAGGGCTCGAGGGTTCTGAGTTGGGCGAGTTCCTTTCCGATAATTCGTGTCTTTTGACTTTTAGTTTGAATAGAGCAATTGTCCCACTTATGGAGACTCTTAGGAAATTTGTTTCAAATAAGAAAGATTTTATTAAAGCGCTTCATGGATATGGGTACTGGAAATTTGCACATCCCCGCAGAATTTTGTACAATGCTGCTTTGTTTGAGAGTTGGGGGATCGTTGGATCTCAACTTTCAAGGTTAGTGATACGGCAACCTTGGCTTTCTTGTGCACCAGAGCCTGTGATTCGAAACTATGTTGCCCGGGCTATAAACATGGGTTTCAATTTAAATTCAAGGATGCTGGTTCATGCAATTATGACGATGAGCAATTTAAGCTTGGAGAAGTTTAACGGAAAGCTTGAGTTGATTCAGAGTTGTGGGTTTTCTGAAGAAGAGGTCATGCAAATGTTTAGAAGAGCGCCAGGGTTGCTGCACCAATCTGAGAAGAAGCTAAAATTTGGAGTTCATGTGTGCTTGGATAAAATTATGCTGCCAAAGTCACTATTGGTTACTAACCCGGTGATTTTGATGTTAAGCATGGAGAAAAGGGTGATTCCTCGATGGAGGGTATTGCAGCTGCTCATCTCAAAAAATTTACTCAAGAAGAGTCCAAGATTTTTTGGAGTTCTAAAATTACAGGAGAAGAAATTCTTGGAGAAGTATATTTCAAAGTTTAGTGATAATGAAGAGGCTTTACTGGAGGCTTACAAGGGTCACTGTCTATCATCAGTTTCTGTTTCACACACTTCTCTGCCGGAGACTTTGGACACTGAAGAATGTGTTTGGATTGAGGAGAACAGAGAGGAAGGGAATTGA 1245 0.4064 MRMSWHHCGAMHFIKLNPALSHSLSNFSRSFLALLSTVVSPQTQATSAERISIIDYLNANFKFSKAQSIYVPKRLSQVRCPQHPLSVVNYFKQIGFSESQISSLLGNQPQILFSRFETLKPKIEYLQLQGLEGSELGEFLSDNSCLLTFSLNRAIVPLMETLRKFVSNKKDFIKALHGYGYWKFAHPRRILYNAALFESWGIVGSQLSRLVIRQPWLSCAPEPVIRNYVARAINMGFNLNSRMLVHAIMTMSNLSLEKFNGKLELIQSCGFSEEEVMQMFRRAPGLLHQSEKKLKFGVHVCLDKIMLPKSLLVTNPVILMLSMEKRVIPRWRVLQLLISKNLLKKSPRFFGVLKLQEKKFLEKYISKFSDNEEALLEAYKGHCLSSVSVSHTSLPETLDTEECVWIEENREEGN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0856 414 FunFam Mitochondrial transcription termination factor-like 151 371 - -
Lele46g0856 414 Pfam mTERF 191 361 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 Pfam mTERF 88 216 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 PANTHER CGI-12 PROTEIN-RELATED 52 367 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 SMART mt_12 102 132 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Lele46g0856 414 Gene3D Transcription termination factor 3, mitochondrial 155 371 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0856 Lele-ChrLele46 15325273 15326517 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele46g0856 mTERF 1.6e-19 No_clan