Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0837 ATGCAAACCTTTGCATCCACCGGCTTCAGTCAAGAACATGGCCCCATCAATGGAGATCTTTGCTTTCACACTACCAACAAATCCTTCTTCTCTGGGTCTCTTCCTTATTACCAGACGCCATCAAGTAGTACTGTGGATTCATCAAAATCACCTAAGTCATCAAATTTAAGCAATAGGAAGCCATCTATAAATATCACCGTCCCTCCAGTGGGCTTAAGGATGAGCTCATCATCGTCGTCGTCGTCGTCGTCGTCATCGGATGTCACAGAGAACAAGCACTACCGAGGGGTTCGACGGCGGCCGTGGGGGAAGTTCGCGGCCGAGATTCGTAACCCGAATCGAAAGGGATCAAGGGTGTGGCTTGGAACCTTCGATACAGCTATGGAAGCAGCAAAAGCATATGATAGAGCTGCGTTTAAGATGAGAGGAAGCAAAGCTATACTAAATTTCCCTCTTGAAATTGGAGCAACAATAAGTTCTGAAGAATCAAAGTCAACAGTGGAAAAGGTAGTTGGTAAGAAAAGGGGAAGAGAGGAAGAAGAGAGTGATGAACAGAACAAGGATGAAGAATTCAAGAAGATGAAGAAGGAGAAGGAAGAGGCAGTTTCACCAGCAGGTGGGGTTGTTTCTTCTTCTTCCTCTGCAACAGTTGGTCCGTTAACGCCGTCATGTTGGAAGGGGTTTTGGGATACTGAGGTTGCCAACACTATTTTCAGTGTTCCTCCGTTATCGCCGCTATCTCCCCCAATGATGATTGTGACGTAG 765 0.4641 MQTFASTGFSQEHGPINGDLCFHTTNKSFFSGSLPYYQTPSSSTVDSSKSPKSSNLSNRKPSINITVPPVGLRMSSSSSSSSSSSSDVTENKHYRGVRRRPWGKFAAEIRNPNRKGSRVWLGTFDTAMEAAKAYDRAAFKMRGSKAILNFPLEIGATISSEESKSTVEKVVGKKRGREEEESDEQNKDEEFKKMKKEKEEAVSPAGGVVSSSSSATVGPLTPSCWKGFWDTEVANTIFSVPPLSPLSPPMMIVT 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0837 254 MobiDBLite consensus disorder prediction 38 90 - -
Lele46g0837 254 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Lele46g0837 254 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Lele46g0837 254 MobiDBLite consensus disorder prediction 38 95 - -
Lele46g0837 254 FunFam Ethylene-responsive transcription factor 2 92 153 - -
Lele46g0837 254 SUPERFAMILY DNA-binding domain 93 153 IPR016177 GO:0003677
Lele46g0837 254 MobiDBLite consensus disorder prediction 161 218 - -
Lele46g0837 254 Gene3D AP2/ERF domain 92 153 IPR036955 GO:0003700|GO:0006355
Lele46g0837 254 Coils Coil 177 197 - -
Lele46g0837 254 Pfam AP2 domain 93 143 IPR001471 GO:0003700|GO:0006355
Lele46g0837 254 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Lele46g0837 254 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Lele46g0837 254 CDD AP2 92 151 IPR001471 GO:0003700|GO:0006355
Lele46g0837 254 PANTHER DNA-BINDING DOMAIN 53 198 IPR044808 GO:0003700|GO:0009873
Lele46g0837 254 MobiDBLite consensus disorder prediction 166 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0837 Lele-ChrLele46 13539569 13540333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0837 53 254 AP2-EREBP Transcription Factor Family AT5G51190 47.143 1.20e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele46g0837 AP2 1.1e-15 CL0081