Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0824 ATGTCAGCTTCAGTATCAACACTTGGGGACAGTGGATGGTTACTGCACATTCAAAATGTCTTGGCTGGCTCAGCTTGGATTGCTACTCGTGTTGCTATTGAAAAGGCTTCTGTGCTTGTACATTGCAGAAGTTCTAGGCTATGGATAAAGGATGTAATAAGCCCCTCAAATCATCCTTGTCCCTTGACGACTCCACTTATCTGGTTTAAGGCACTTGTTGAAAAAGACTGGTTAGCGTTTGGTCATCTATTTTCAGATCGTGTTGGAATGCAATCAGTCACTGGAAGTGGCAACACTCCTGAGTTGTCTTGGCAATCTTCCGGAAATCAATCATCAGGAGCATTCAGTTCCCAACCTCCAACCTCCCATGCACAAACATCAAACAACTACTCTCCAATTTTTCTGCAGTGGGTTGATTGTGTTTCACAATTGTTGCGGACGTATCCTTTTGCTCTTGAATTCTCCTCAGTAAGTATTCCTTTACCATGTGTGACTTTTTCTGCAAATATTCCTCTATTTCATTCTTTGTTTTCTGGCTCTGTTTCTGGTCTCTCTACTACTGATGACTTGTACTGTTGTATGATTCAGGCTTTCCTGGTGGACGTCTTAGACTCTGTGCTTTCTTGCCGCTTTGGAAACTTCTTATGTAACAGTGTAATTTGGTCACTAGTAAAGATATTACTTGGGAATTGTTCTGAAGGGGGCATCAGATGA 714 0.4202 MSASVSTLGDSGWLLHIQNVLAGSAWIATRVAIEKASVLVHCRSSRLWIKDVISPSNHPCPLTTPLIWFKALVEKDWLAFGHLFSDRVGMQSVTGSGNTPELSWQSSGNQSSGAFSSQPPTSHAQTSNNYSPIFLQWVDCVSQLLRTYPFALEFSSVSIPLPCVTFSANIPLFHSLFSGSVSGLSTTDDLYCCMIQAFLVDVLDSVLSCRFGNFLCNSVIWSLVKILLGNCSEGGIR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0824 237 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 156 IPR029021 -
Lele46g0824 237 MobiDBLite consensus disorder prediction 96 124 - -
Lele46g0824 237 Pfam Myotubularin-like phosphatase domain 4 156 IPR010569 -
Lele46g0824 237 ProSiteProfiles Myotubularin phosphatase domain. 1 237 IPR010569 -
Lele46g0824 237 PANTHER MYOTUBULARIN-RELATED 2 44 IPR030564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0824 Lele-ChrLele46 9685877 9688586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0824 1 218 Protein tyrosine phosphatase (PTP) family AT3G10550 46.087 2.04e-46 162