Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0822 ATGTTCAATCTCAAGCCACCTCTTCAAGGGCAGGGTTGGGAATCTCCACGAGAACCTTATGAAGTGAAAGCTTGGATATCAGCAAAGACAGTTGCAGGGAAGTTGGTCGTGCCCCGCATAGAAGAACCTTATTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGGATAGGAACAATGACACGGGGAGAGAAGGCTGTAATATTTGTTTGTAGTCAGTATCTAACTCAATCTCCTCTGATGCCGCTGAATGAAGATTATGAGGAAGTCCAGTTTGAAGTGGAGCTTTTCCACTTTATTCAAGTTAGAGATATGCTTGGAGATGGGCGCCTAATAAAACGTCGGATTCGTGATGGGAAAGGTGATTTTCCAATGGATTGCCCTCTTCATGATAGTCTACTTCGTGTTCATTACAAGGGTATGGTTCTTGATAAAGAAAAGAGGGTATTCTATGACACGAGAGTTGATAATGAGGGTCAACCGCTGGAGTTCTGTTCTGGAGAAGGGCTTGTGCCGGAGGGGTTTGAAATGTGTGTACGTCTGATGCTGCCTGGAGAGGTAGCTCTCGTCACTTGCCCCCCAGACTTTGCTTATGATAAGTTTCCGAGGCCGGCAAATGTTAATGAGGGTGCTAACATTCAATGGGAAATTGAGCTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGATTTGACTTCCAAAGTATAATGGATGATGCTGAGAAGATTAGAAACACGGGTAACAGGCTGTTCAAAGAAGGAAAATATGAACTTGCCAAGACAAAGTATGAAAAGTTACTTCGAGAATTTAATCACATCAATCCACAAGATGATGAGGAAGCAAAAGTATTTTCAGATACACGTAACTTGTTACATCTGAATGTGGCTGCATGCTATCTGAAATTGGGAGAATTTAGGAACTCCATTGAGTTTTGCAATAAGGTTTTGGATGCAAACCCTGCACATGTCAAGGGTCTTTACCGTCGTGGAATGGCCTACATGGCAGCTGGAGATTTTGAAGAAGCAAAGAGTGATTTCAACATGGTGATGAAAGTTGACAAGTCAACTGAACCAGACGCAACCTCGGCTCTTCTTAAACTGAAGCAGAAGGAGCAGGAAGCTGAGAAGAAGGCTCGAAAGCAATTTAAAGGCCTTTTCGACAAGAAACCTGGAGAAATTGCAGAAGTCACTGCTGAAGAGGATAAAGATCAGAAGATAAGCGAAAGCAAGGAGGAGGATGAAGGACATGGGGGCTCGGATTCAGAGAATTCACATGAAGTTGCACCAGATGCCCCTCAAGTGGGTTGGTTCTCTCGCTTTTTGCCAAGCAGATTATTATCATCCTTATGGCTTCGAAGATGTACCATTCTGTGA 1386 0.4329 MFNLKPPLQGQGWESPREPYEVKAWISAKTVAGKLVVPRIEEPYFFTFGKSEVPKGLEMGIGTMTRGEKAVIFVCSQYLTQSPLMPLNEDYEEVQFEVELFHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGMVLDKEKRVFYDTRVDNEGQPLEFCSGEGLVPEGFEMCVRLMLPGEVALVTCPPDFAYDKFPRPANVNEGANIQWEIELLGFEMPKDWTGFDFQSIMDDAEKIRNTGNRLFKEGKYELAKTKYEKLLREFNHINPQDDEEAKVFSDTRNLLHLNVAACYLKLGEFRNSIEFCNKVLDANPAHVKGLYRRGMAYMAAGDFEEAKSDFNMVMKVDKSTEPDATSALLKLKQKEQEAEKKARKQFKGLFDKKPGEIAEVTAEEDKDQKISESKEEDEGHGGSDSENSHEVAPDAPQVGWFSRFLPSRLLSSLWLRRCTIL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0822 461 Pfam Tetratricopeptide repeat 328 358 IPR019734 GO:0005515
Lele46g0822 461 Pfam Tetratricopeptide repeat 297 326 IPR019734 GO:0005515
Lele46g0822 461 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 22 100 IPR001179 GO:0003755
Lele46g0822 461 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 136 224 IPR001179 GO:0003755
Lele46g0822 461 SUPERFAMILY FKBP-like 93 226 - -
Lele46g0822 461 ProSiteProfiles TPR repeat profile. 293 326 IPR019734 GO:0005515
Lele46g0822 461 Gene3D - 107 226 IPR046357 GO:0003755
Lele46g0822 461 ProSiteProfiles TPR repeat profile. 327 360 IPR019734 GO:0005515
Lele46g0822 461 MobiDBLite consensus disorder prediction 397 427 - -
Lele46g0822 461 FunFam Peptidylprolyl isomerase 105 229 - -
Lele46g0822 461 Gene3D Tetratricopeptide repeat domain 238 392 IPR011990 GO:0005515
Lele46g0822 461 SUPERFAMILY FKBP-like 8 103 - -
Lele46g0822 461 SUPERFAMILY TPR-like 241 383 IPR011990 GO:0005515
Lele46g0822 461 MobiDBLite consensus disorder prediction 397 433 - -
Lele46g0822 461 FunFam Peptidylprolyl isomerase 232 388 - -
Lele46g0822 461 Gene3D - 8 106 IPR046357 GO:0003755
Lele46g0822 461 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 135 227 IPR001179 GO:0003755
Lele46g0822 461 PANTHER INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 43 105 - -
Lele46g0822 461 SMART tpr_5 293 326 IPR019734 GO:0005515
Lele46g0822 461 SMART tpr_5 244 277 IPR019734 GO:0005515
Lele46g0822 461 SMART tpr_5 327 360 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0822 Lele-ChrLele46 9582007 9622543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0822 8 392 Calmodulin-binding Proteins AT5G48570 28.141 2.53e-38 145