Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0793 ATGTCTTCCGATTTGGATGAGTGCCGGGAACATCTGCTAGCGGTAGATGTGAATGCTCAAACTCAGATCGACAAGCTTTCCAAATTTCAGATTCGAAATCTCACCAAAGTCTCCGATGCCGGAGTTCCAATTCTCAATGGCATCGACTTGGACGTTCCCAAGGGCATGATACTTGGCGTCGTCGGACCCAGCGGTAGCGGCAAATCGACGCTTCTCAGGGCATTGAACCGCCTTTGGGAGCCTCCCTCCGGCACCGTCTTTCTCGATCATAAGGATATCTGCGATCTCGATGTTCTCTCCCTCCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCTGCCCTTTTCGAAGGCTCAGTAGCAGACAATGTGAGGTATGGGCCCCAACTAAGAGGGAAAAAAATAAGTGATGAAGAGGTACGCGAGTTGCTGTTAACAGCAGACCTTGATGCTTCTTTCATGAACAAGAAGGGCTCTGAACTCTCTGTGGGTCAAGCTCAACGAGTTGCACTTGCCAGGACTTTAGCTAATTCCCCAGAGGTTTTGTTGCTGGATGAACCAACCAGTGCGCTAGACCCAATATCAACAGAGCACATAGAAGATGCTCTAATGAAGTTGAACAAGAACAGTGGTATGACTGTGATAATTGTCTCTCACAGCATCAAACAGATACAAAGGATAGCTGATTTGGTGTGCCTTCTTGTTGATGGTCAAATTGTTGAAGTTCTAAAGCCTCATCAACTGTCACAAGCCACTCATCCCATGGCCCAAAGGTTTCTTCAACTTAGTTCCTAG 792 0.4798 MSSDLDECREHLLAVDVNAQTQIDKLSKFQIRNLTKVSDAGVPILNGIDLDVPKGMILGVVGPSGSGKSTLLRALNRLWEPPSGTVFLDHKDICDLDVLSLRRKVGMLFQLPALFEGSVADNVRYGPQLRGKKISDEEVRELLLTADLDASFMNKKGSELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTEHIEDALMKLNKNSGMTVIIVSHSIKQIQRIADLVCLLVDGQIVEVLKPHQLSQATHPMAQRFLQLSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0793 263 SMART AAA_5 54 244 IPR003593 -
Lele46g0793 263 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 1 262 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lele46g0793 263 CDD ABC_PstB_phosphate_transporter 29 247 IPR005670 GO:0005315|GO:0016020|GO:0035435
Lele46g0793 263 FunFam ABC transporter, ATP-binding protein 27 258 - -
Lele46g0793 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 250 IPR027417 -
Lele46g0793 263 Gene3D - 25 262 IPR027417 -
Lele46g0793 263 Pfam ABC transporter 45 188 IPR003439 GO:0005524
Lele46g0793 263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 260 IPR003439 GO:0005524
Lele46g0793 263 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0793 Lele-ChrLele46 6938238 6941286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0793 42 252 Calmodulin-binding Proteins AT2G36910 31.799 2.29e-30 117