Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0787 ATGGCGAGAAAGTGCTCGCATTGTGGGAAAATAGGGCATAATTCTAGGACTTGCACATCTTTTAGAAGGACTTGTGGTGTAGGACTTCGTCTCTTTGGTGTTCAGCTTGAAACATCTTCTCCTTCTTCTTCTTCTGCTTCTGCTTCTTGTGTTTTCGCCATGAAGAAAAGCTTGAGCATGGATTCTTTACCAGCTTCTTCATCGTCGTCCTCTCCATCTTCATCGTTCTCTAATTCATCAAGAATCACCATTGATGAAAACTCTGTGGCAGAGAGATCCTCTGTTGAGTATCTATCAGATGGTCTCATAGATGCAGCATCAGCACAAGACAGAAGAAAAGGAATAGCTTGGACAGAAGATGAACACAGAAGATTTCTGGTTGGGCTTGAGAAGTTAGGAAAAGGAGATTGGAGAGGAATTTCCAGAAATTATGTCACAACAAGAACGCCTACTCAAGTAGCTAGTCATGCTCAAAAATACTTTCTTCGGCTCGCCGCCGTCAACAAGAACAAGAGACGACCAAGCCTCTTTGACACGGTGGGTATACAAGAGGATGTTAAATCTGGAAGCTCCAATATTAAGTGTGAAGAAGATGACCTGCAGAATCATACTAGCTTGACATTAATGGGCCAAAAGGGAACTAAATCTGAAGCAGCAATAGTGCCTACGTGGCAGCATAATAATTCCCAGATGATGAAATCTTCTTCTTCTTCACCCACATCATCATCGCCTGATCTGGAGCTCACACTTGCAGCACCCAAGTCCCTGCAACAAAATGGATCATCATCTTCTTCTTTTCTAAGCTCTATTTGTGTCACATGA 822 0.427 MARKCSHCGKIGHNSRTCTSFRRTCGVGLRLFGVQLETSSPSSSSASASCVFAMKKSLSMDSLPASSSSSSPSSSFSNSSRITIDENSVAERSSVEYLSDGLIDAASAQDRRKGIAWTEDEHRRFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLAAVNKNKRRPSLFDTVGIQEDVKSGSSNIKCEEDDLQNHTSLTLMGQKGTKSEAAIVPTWQHNNSQMMKSSSSSPTSSSPDLELTLAAPKSLQQNGSSSSSFLSSICVT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0787 273 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Lele46g0787 273 PANTHER TRANSCRIPTION FACTOR KUA1 3 240 - -
Lele46g0787 273 SUPERFAMILY Homeodomain-like 111 164 IPR009057 -
Lele46g0787 273 Pfam Myb-like DNA-binding domain 116 161 IPR001005 -
Lele46g0787 273 SMART sant 113 163 IPR001005 -
Lele46g0787 273 Gene3D - 115 167 - -
Lele46g0787 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 165 IPR017930 -
Lele46g0787 273 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 113 163 IPR006447 GO:0003677
Lele46g0787 273 FunFam transcription factor MYB1R1 115 166 - -
Lele46g0787 273 ProSiteProfiles Myb-like domain profile. 109 161 IPR001005 -
Lele46g0787 273 ProSiteProfiles SANT domain profile. 117 165 IPR017884 -
Lele46g0787 273 MobiDBLite consensus disorder prediction 254 273 - -
Lele46g0787 273 CDD SANT 116 161 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0787 Lele-ChrLele46 6663909 6665214 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele46g0787 Myb_DNA-binding 4.3e-11 CL0123