Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0785 ATGGTAGCGGGAGGTTTACCCTCAGTCATTCGCAGGTTGAAGAGAGAAGAATTTAAACGAACAAAGCATGATTCCGACTTCTCTGATTGGAAGATTCTCATTGGCCCTTCAGATTGGGAGGACTATTCTAGAGGGAAGGAAGGGTCAGCTAGGTACAGAATTCATAACCTCCCAGAAAACTTGAGTCCAGGAGTTTATGAGCTTGGTATTGCTGTGTCTCGCATTGGTTTAGGCCGTAAGGTTTACAAGCTTGATCCAGACCGTATAGTTGTGGTTTACCTTGGAAAAGCTGACATTGTGAGAACAAGACTCCAACAGTATGGCCGAACTGGAGCTCATTTGAGCAATAACGGCTTAACTTCTGATCCAGATGATAGTAATCCTGCTTTTACCCATAAAGGGGAGGGACTTTTTGAAGAAATATTTTCACAAGGTTATCCGGTTGTTTATAGATGGGCTCCTATGCAAAACAAAGAAGACGCCAAGAAAACGGAAAGTCAGCTGCTAAGAGTATTTGATTATGCATGGAACGTGAGCAATAATGGTACCCGACGCCTGGAAGATATTCTTCAGAAGATTAATAGAGTTGCTTCAGGTCCCACAACATTTTCAAACATGACCAAGCTGCTTCAACCTTTCACCCAGAGGCGTGTGGGTATCCGAATCAAATCAAGCAGCATGCCTTCCCCAGATGTCAAATTACAAGAAATTGACAGAGGCAGCCATAATTTCTTATCTCGAGTATTTAAATTTGGCAGATCAAATCCAAGGTTAGTTCAAGATGTCCTTGGTGTAATTCAGGACAATACTACAAGACTCTGTGGAGTGATCTTGGGTGATGGTTCTGTTTGTACAAGATCACCAGCTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTCCACTTCCAAACGGACAATGAAGTCAGAGAACAATCTTGACATAGAACTCAATGTGAGCGAAGGCTATGGTGAAGAACATGTCCCTAGTGTCATTCAGGACAATACTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTGTTTGTATAAGACTACCTGTTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTTCACTTCCAAAAAGACAATGAAATCAGAGAACAATCTGGACATAGAACTCAACCTGCCCTATCGCCTGAAGAGCGAAGGCCATGGTGAAAAGCATGTTAACCAAGATTTGAAAGACCCTTCCCATATTACAGTTGAGAATCCTCTTGATGGTAGAATTACCAATATATGTGGAATAATTTTGAATGATGGTACCCCTTGTAGGAGTCCACCTGTTAAAGGGAGAAAAAGGTGTCATGAGCATAAAGGAAAGAGAATCAATCATTTTAATAAAGCCCATTGCAATCTAGGGGGATGA 1425 0.4154 MVAGGLPSVIRRLKREEFKRTKHDSDFSDWKILIGPSDWEDYSRGKEGSARYRIHNLPENLSPGVYELGIAVSRIGLGRKVYKLDPDRIVVVYLGKADIVRTRLQQYGRTGAHLSNNGLTSDPDDSNPAFTHKGEGLFEEIFSQGYPVVYRWAPMQNKEDAKKTESQLLRVFDYAWNVSNNGTRRLEDILQKINRVASGPTTFSNMTKLLQPFTQRRVGIRIKSSSMPSPDVKLQEIDRGSHNFLSRVFKFGRSNPRLVQDVLGVIQDNTTRLCGVILGDGSVCTRSPAERRMRCVEHKGMRINGSTSKRTMKSENNLDIELNVSEGYGEEHVPSVIQDNTTRFCGVVLGDGSVCIRLPVERRMRCVEHKGMRINGFTSKKTMKSENNLDIELNLPYRLKSEGHGEKHVNQDLKDPSHITVENPLDGRITNICGIILNDGTPCRSPPVKGRKRCHEHKGKRINHFNKAHCNLGG 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0785 474 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 338 390 IPR038909 GO:0003677|GO:0006355
Lele46g0785 474 Pfam GIY-YIG domain-containing protein 27 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0785 Lele-ChrLele46 6623663 6626459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0785 345 465 HRT Transcription Factor Family AT5G56780 37.190 1.19e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Lele46g0785 None None None