Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0779 ATGAATTTGGGCGAAGGATATGGCTTAATGAAGTGTCTGCCGACAGCTCTTGTTTTGGAAGAATTTATAGAATCTGATTGTAAAGGGTTGACTTTGGCTGTTACTGATAAGGGTTCTCTTCCTGATTGGGTGAATGTGTGGTTTGTTTCGTTGATTTGGTGGTGTTTGCTATTTCGTTCTCCTGAATTGTGGGGAAAAAAAGTAGACTTACAGGTTTCGTTCAGATTCTCATTTGCCCTTCATATTGGTAGGACTATTCTAGAGGGAAGGAAGGTTCAGCTAGGGCGTAAGGTTTACAAGCTTGATCCAGACTGTATAGTTGTGGTTTACCTAGGACAAGCTGACAATGTGAGAACCAGACTCCAACAGTATGGCCGAACTGGAGCTCATTTGAGCAATAACTGCTTAACATCTGATCCAGATGATAGTAATCCTGCTTGCATTGATCAACAAAATTGCTCTCTGCCTGTGTTCAACTCAGGATTACTCTGCCGTATTATCAGCCAAAACTACAAAATCTTTCAAAAAGCACTGGAAAATGTTTACTCTTAA 552 0.4058 MNLGEGYGLMKCLPTALVLEEFIESDCKGLTLAVTDKGSLPDWVNVWFVSLIWWCLLFRSPELWGKKVDLQVSFRFSFALHIGRTILEGRKVQLGRKVYKLDPDCIVVVYLGQADNVRTRLQQYGRTGAHLSNNCLTSDPDDSNPACIDQQNCSLPVFNSGLLCRIISQNYKIFQKALENVYS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0779 183 Pfam GIY-YIG domain-containing protein 94 173 - -
Lele46g0779 183 CDD GIY-YIG_SF 98 136 - -
Lele46g0779 183 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 93 154 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0779 Lele-ChrLele46 6532933 6533891 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0779 100 133 HRT Transcription Factor Family AT5G56780 64.706 1.50e-09 54.3