Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0765 ATGATAATCGGCGAGTCTCATCAGGCTAAACCAACGGTCCACGATCCTCCTTGGCCGCTTCACCTCGATGATTTGACCTCTGATATATGTTCTCCTTACCCGTTAAGTGGTGTCTCCTTCGACTCCGACGGTAATGCCAGTACCAGCGATTACTCGCCACTTTACTTACAAGAGGCTCTATCGGCGTGGCAGCGTTATCTCCCATCCAACGATGCCGACATCGACTCTGATTCTGATGTTACGGGTCGTGACTCCGATGCTCCGGTCGATGCCTACACCTGCGATCATTTCCGTATGTACGAGTTCAAGGTGAGGAGGTGCGCGCGTGGCAGGTCTCATGACTGGACTGAATGTCCTTATGCTCATCCCGGCGAGAAGGCTCGCCGGAGAGATCCTAGGAAGTATCACTATTCAGGAACTGCATGCCCTGATTTTCGCAAAGGTAGCTGTAAGAAGGGGGATTGTTGTGAGTTCGCTCATGGCGTATTTGAGTGTTGGCTTCACCCGTCTCGTTATCGTACTCAGCCTTGTAAGGACGGTACGAGCTGCCGGAGAAGGGTTTGCTTTTTTGCTCACACGCTGGAGCAACTGAGGATTCTGTCTCAGCAGAGTCCAAGGAGTGGTAACTCTAACTCGGTAGATTCATACGACGGCTCTCCTTTGAGGCAGGCGATGGCGATTGAGTCTTGTGCTAAAACGCTGCCGTTCATTTCGTCTCCGTCTTCGATTTCACCTCCGGCTAATTCTCCGACGGAGTCTCCTCCTGTGTCTCCGATGGCGCAGTCTCTGAGCCGGTCTGTTTGTTCAAGCTCCATCAATGAGATGGTGGCTTCTCTGCGAAATTTGCAGCTAGGTAAGGCCAAGTCTTTGTCTTTATCCTCTTCTTGGAATGTTCCTATGGGATCTCCCTGTTTCGGGTCTCCGAGGGGATCCATACTCCGACCCGGATTCTGCAGCCTCCCCACCACACCTACACAAGCGCCAACTCGCGCCGGAGGCAGCTATTTTGATATTTGGGAGCAGAGTTGTGAGGAGGAGCCGGTGATGGAGCGGGTAGAGTCCGGAAGCACCATAAGGTCAAAGATGTTCGAGAAATTGAGCAAAGAGAACTCCCTGGATAGGTCGGATCCGGGTTAA 1137 0.5242 MIIGESHQAKPTVHDPPWPLHLDDLTSDICSPYPLSGVSFDSDGNASTSDYSPLYLQEALSAWQRYLPSNDADIDSDSDVTGRDSDAPVDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDCCEFAHGVFECWLHPSRYRTQPCKDGTSCRRRVCFFAHTLEQLRILSQQSPRSGNSNSVDSYDGSPLRQAMAIESCAKTLPFISSPSSISPPANSPTESPPVSPMAQSLSRSVCSSSINEMVASLRNLQLGKAKSLSLSSSWNVPMGSPCFGSPRGSILRPGFCSLPTTPTQAPTRAGGSYFDIWEQSCEEEPVMERVESGSTIRSKMFEKLSKENSLDRSDPG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0765 378 Gene3D - 132 207 - -
Lele46g0765 378 ProSiteProfiles Zinc finger C3H1-type profile. 137 163 IPR000571 GO:0046872
Lele46g0765 378 MobiDBLite consensus disorder prediction 241 261 - -
Lele46g0765 378 PANTHER UNKEMPT FAMILY MEMBER 59 375 IPR045234 -
Lele46g0765 378 FunFam Zinc finger CCCH domain-containing protein 66 94 162 - -
Lele46g0765 378 SMART c3hfinal6 171 194 IPR000571 GO:0046872
Lele46g0765 378 SMART c3hfinal6 136 162 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0765 Lele-ChrLele46 6250197 6251333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0765 92 258 C2H2 Transcription Factor Family AT5G12850 53.179 3.05e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele46g0765 None None None