Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0756 ATGTTTGTTCCAAAACGGGCCTCGGTTTCAACTCAAAAGGTCCAGAATAGCGCAAATTTGGGCTACAACACAGAGAAAGCACAAGAAGACAGAGCAAGTTCCGATTTTCAAAGCCCCCGAAAGCGCCGAACTCGCGAGAACTCAACCCTCCAGAAGAAGATGTCGTGGCAAACCTATGTCGATGAGCACCTCATGTGCGACATAGAAGGTAATCATCTCAGTTCTGCTGCTATCGTTGGTCAAGACGGCAACGTGTGGGCTCAGAGCGCCACTTTCCCTCAGTTAAAGCCTGAGGAAATCACTGGTATCATGAATGACTTTGCTGAACCCGGATCACTTGCTCCAACTGGATTATATCTTGGAGGCACTAAATATATGGTGATTCAAGGTGAACCAGGAGCAGTCATCCGAGGGAAGAAGGGTCCTGGTGGGGTTACTGTCAAGAAGACCAGCCAAGCCCTAATCATTGGAATTTATGATGAACCAATGACTCCTGGTCAGTGCAACATGATAGTGGAAAGGCTTGGTGATTACCTCATTGATCAGGGTCTTTAA 555 0.4739 MFVPKRASVSTQKVQNSANLGYNTEKAQEDRASSDFQSPRKRRTRENSTLQKKMSWQTYVDEHLMCDIEGNHLSSAAIVGQDGNVWAQSATFPQLKPEEITGIMNDFAEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTSQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0756 184 SMART prof_2 54 184 IPR005455 GO:0003779
Lele46g0756 184 MobiDBLite consensus disorder prediction 28 49 - -
Lele46g0756 184 PRINTS Profilin signature 56 65 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Profilin signature 153 166 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Profilin signature 93 113 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Profilin signature 74 83 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Profilin signature 117 131 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Profilin signature 166 183 IPR005455 GO:0003779
Lele46g0756 184 Gene3D Dynein light chain 2a, cytoplasmic 52 184 - -
Lele46g0756 184 MobiDBLite consensus disorder prediction 8 27 - -
Lele46g0756 184 PANTHER PROFILIN 54 183 IPR005455 GO:0003779
Lele46g0756 184 Pfam Profilin 54 183 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Plant profilin signature 124 133 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Plant profilin signature 80 93 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Plant profilin signature 170 183 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Plant profilin signature 54 67 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Plant profilin signature 137 152 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Plant profilin signature 157 170 IPR005455 GO:0003779
Lele46g0756 184 PRINTS Plant profilin signature 105 119 IPR005455 GO:0003779
Lele46g0756 184 MobiDBLite consensus disorder prediction 1 50 - -
Lele46g0756 184 CDD PROF 55 183 IPR005455 GO:0003779
Lele46g0756 184 FunFam Profilin 54 184 - -
Lele46g0756 184 SUPERFAMILY Profilin (actin-binding protein) 55 183 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0756 Lele-ChrLele46 5801700 5803619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0756 54 184 Cytoskeleton Gene Families AT2G19760 78.626 2.84e-78 228