Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0753 ATGGAGAAGACCTTTGTTCTCTCTTTTCTCTTCCTTCTCTTCCATTTAGCTGCAGCAAATGCTCTTGATCTTGGTGTTGGTGTAGGAATCGGTATCGGCATTGGAAATGGCGGTGGCAGGGGTGGTGGAGGAGGCGGAAGCGGAGGCGATGGTGGGGCTAATAGTCCGGAATCTTCAAAGATGAACGTAGCTTACAAAAGTCTGCAAGCATGGAAATCAGCTATAACTGATGACCCATTAAAGATTCTTGATACTTGGATAGGTTCTAACGTTTGTTCTTATAAAGGAGTATTTTGTTCCAGAGCATCATCATCAGATGGTTCTTCTTTTGTTGCAGGAATAGATCTCAACCATGCAAATCTTCAAGGAACTCTTGCTAAAGACCTATCTTTACTCACTGATATGTCTCTTCTTCATCTTAACAGCAACAGATTCACTGGTTCAGTTCCTGAAACATTCAAAGATCTTTCATCTCTGGAAGAATTAGATCTCAGTAACAACCAGTTTTCAGGTGAATTCCCCACAGTAGTTCTGAAAATGCCAAGTCTCGTTTACTTGGATCTCAGATTCAACTCCTTCTCTGGAACCCTCCCAGGTCAACTTTTCAGTAAAAATCTCGACGCAGTTTTTCTCAACAATAACCGATTCCAAGGAGAAATCCCACGGAATCTTGCTTCTTCATCAGCTTCTGTGATAAACCTAGCTAACAACAAATTCACTGGAAACATCCCAATAACAAGTTTAGGTTTAGTGGGTAGTTCTAATTCTAAGCTGAAGGAGATTCTGTTCTTGAATAACCAGTTAACAGGTTGTATTCCTCAAGGAGTGGGATTATTCAGAGACGTGCAAGTTCTTGATGTAAGCTTTAATTCATTGGTGGGTCAATTGCCAGGAACGTTATCTTGTTTGGAAGATATTGAAGTTCTTAACTTGGCTCATAATCAGCTTTCTGGGGAATTATCAGATGTGATATGTTCGTTGAAGAGTCTAGTGAATTTAACTGTGGCTCATAATTTTTTTAGTGGGTTTAGTGAAGAATGTATGAAGCTTTTGATTAGGAATGTGGGGTTTGATTTTTCTGATAATTGTATTCCTGGGAAGAACATGCAGAGACCTAAACCAGAATGTTCTGTGATCCCAGGTGGTAGCTTAAGTTGTCTCAGAATCCCCATACCAAAGCCTCTTGATTGTGCTTCATTGGCCATAACTTCTCCTTGA 1218 0.4031 MEKTFVLSFLFLLFHLAAANALDLGVGVGIGIGIGNGGGRGGGGGGSGGDGGANSPESSKMNVAYKSLQAWKSAITDDPLKILDTWIGSNVCSYKGVFCSRASSSDGSSFVAGIDLNHANLQGTLAKDLSLLTDMSLLHLNSNRFTGSVPETFKDLSSLEELDLSNNQFSGEFPTVVLKMPSLVYLDLRFNSFSGTLPGQLFSKNLDAVFLNNNRFQGEIPRNLASSSASVINLANNKFTGNIPITSLGLVGSSNSKLKEILFLNNQLTGCIPQGVGLFRDVQVLDVSFNSLVGQLPGTLSCLEDIEVLNLAHNQLSGELSDVICSLKSLVNLTVAHNFFSGFSEECMKLLIRNVGFDFSDNCIPGKNMQRPKPECSVIPGGSLSCLRIPIPKPLDCASLAITSP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0753 405 Gene3D Ribonuclease Inhibitor 250 377 IPR032675 -
Lele46g0753 405 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 56 389 - -
Lele46g0753 405 SUPERFAMILY L domain-like 69 364 - -
Lele46g0753 405 PRINTS Leucine-rich repeat signature 303 316 - -
Lele46g0753 405 PRINTS Leucine-rich repeat signature 159 172 - -
Lele46g0753 405 Pfam Leucine rich repeat 137 192 IPR001611 GO:0005515
Lele46g0753 405 Pfam Leucine rich repeat N-terminal domain 66 100 IPR013210 -
Lele46g0753 405 Gene3D Ribonuclease Inhibitor 179 248 IPR032675 -
Lele46g0753 405 Gene3D Ribonuclease Inhibitor 63 178 IPR032675 -
Lele46g0753 405 FunFam Leucine-rich repeat extensin-like protein 1 65 226 - -
Lele46g0753 405 SMART LRR_typ_2 303 327 IPR003591 -
Lele46g0753 405 SMART LRR_typ_2 132 155 IPR003591 -
Lele46g0753 405 SMART LRR_typ_2 156 179 IPR003591 -
Lele46g0753 405 SMART LRR_typ_2 180 204 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0753 Lele-ChrLele46 5771964 5773181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0753 57 388 Leucine-rich Repeat extension Gene Families AT3G24480 51.183 1.86e-110 331