Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0749 ATGAAATCTCACCCTCTCATCGATGAGTTCATTCCCACCATCGATGGAGAAGACGGCATCTGCTACACCCATCCCGAGAAACTCCCTGGAGTGACGAGGGATGGGTTGAGCAGGCACTTTTTTCACAGGCCATCGAAGGCGTATACGACAGGGATGAGGAAGAGAAGGAAAATCCAGAACGAGTGTGATCAGTTACAAGGAGCTGGAGGAGGAGGAGAAACCAGATGGCACAAAACTGGAAAAACCAGACCAGTTCTTGTGAATGGCAAGCAAAAAGGTTGCAAGAAAATCCTCGTACTCTACAAAAACTTTGGAAAAAACCGAAAGCCTGAGAAGACCAATTGGGTTATGCATCAGTACCATTTGGGACAAGATGAAGAAGAGAAAGAAGGCGAGCTTGTCAGTACAAGTGGGAGTTGTTCTTCTAAAGAAATAGTCACTACTCATAGAGATCATGACATCTCTACCACTGTTGCTGCTGTTGCTGTTTCTGTTCCTCCGGCGCCATTAACGTCGACGACCTTCACTGCTTTGGATCTTCATCATCATCAGCACCTCAAATTCGACCATTTCAGCTTCATCCCATTCAGAAAAAGCTTCGATGAGGAATCATCTATCACACACTATCAACAAGAAGCAGAATGGTTGAAGTATTCTTCATATTGGCCTGATTCTGATAATCCAGGTCATCATCATGGTTAG 702 0.4487 MKSHPLIDEFIPTIDGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGMRKRRKIQNECDQLQGAGGGGETRWHKTGKTRPVLVNGKQKGCKKILVLYKNFGKNRKPEKTNWVMHQYHLGQDEEEKEGELVSTSGSCSSKEIVTTHRDHDISTTVAAVAVSVPPAPLTSTTFTALDLHHHQHLKFDHFSFIPFRKSFDEESSITHYQQEAEWLKYSSYWPDSDNPGHHHG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0749 233 Gene3D NAC domain 1 147 IPR036093 GO:0003677|GO:0006355
Lele46g0749 233 ProSiteProfiles NAC domain profile. 1 141 IPR003441 GO:0003677|GO:0006355
Lele46g0749 233 SUPERFAMILY NAC domain 3 127 IPR036093 GO:0003677|GO:0006355
Lele46g0749 233 Pfam No apical meristem (NAM) protein 3 122 IPR003441 GO:0003677|GO:0006355
Lele46g0749 233 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 203 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0749 Lele-ChrLele46 5734685 5737646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0749 3 134 NAC Transcription Factor Family AT5G56620 80.303 1.88e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele46g0749 NAM 1.2e-14 No_clan