Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0746 ATGGCTGCAAGTTTTGCATATAAATGTTCTCATGTGGGCCATTCTCTGCTTGGTGGGGTAGGCAATAGTTTATCTGGTTTAGTCACCACATCACAAGAGATCATATGCAGCAAATTCTTGTCTCCGCAGCAGCGCACTTTCATACAGATGAGGACTGTTCTCAAGGTTGTGGATAACTCAGGGGCTAAGAAGGTTATGTGCATACAACCTCTGAAAGGGAGGAAAGGGGCAAGATTGGGTGACACTATAATTGCATCAGTAAAGGAAGCCCATCCTAATGGGAAAGTTAAAAAAGGAAAAGTCGTGTATGGTGTGGTTGTGCGTGCGGCTATGCAAAGGGGGCGATGTGACGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGGCAGCCGATTGGGACGAGAGTTTTCGGGCCAGTCCCACATGAGCTGAGGATGAAGAAACATGTCAAAATACTTACTTTAGCAGGGCACATTGCTTAA 501 0.4611 MAASFAYKCSHVGHSLLGGVGNSLSGLVTTSQEIICSKFLSPQQRTFIQMRTVLKVVDNSGAKKVMCIQPLKGRKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHVKILTLAGHIA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0746 166 Gene3D Ribosomal protein L14 47 166 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele46g0746 166 Hamap 50S ribosomal protein L14 [rplN]. 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele46g0746 166 ProSitePatterns Ribosomal protein L14 signature. 104 130 IPR019972 -
Lele46g0746 166 SUPERFAMILY Ribosomal protein L14 48 165 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lele46g0746 166 FunFam 50S ribosomal protein HLP, mitochondrial-like 47 166 - -
Lele46g0746 166 SMART Ribosomal_L14_2 47 166 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele46g0746 166 TIGRFAM rplN_bact: ribosomal protein uL14 48 165 IPR005745 GO:0003735|GO:0006412|GO:0015934
Lele46g0746 166 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 48 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lele46g0746 166 Pfam Ribosomal protein L14p/L23e 48 165 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0746 Lele-ChrLele46 5697257 5699509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0746 58 149 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.694 3.37e-09 50.8