Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0743 ATGTTGATTTCTCATTGTATTTGCTTTCTTCTTCTTCTTCTTCTGCAAAATCCTTCTGCAACATTGTGCCACACCAAGGGACTTAGACCCGGCAGGCATACTAATTCGGGTCTTGGGTTATCCACCAACAGGACCCAAGTCGAGAATTCGGAGCAGCAATTCACGAGATGGGTTAACTTTGTTGGTAGTCTCAAGCATTCTGTGTTTAAGACTGCAAAAAACAAGCTTTTTGCTTCTTACACTCTTCACGTTTCCAAGAATCCTGCCGTAGCAGATTTTGCAACTATTCAAGAAGCCATTGATTCTCTTCCTTCCATTAATCTCGTGAGAGTGGTTCTTAAGGTTCATGCAGGTGTTTACACTGAGAAAGTGAACATTCCTCCTATGAAATCCTACATAACTATAGAAGGAGCGGGAGCAGATAACACCATAGTTCAATGGGGTGACACAGCTCAAACACCAGGTCCCAGAGGACAGCCATTAGGAACATTATATTCCGCTACATTTGCAGTGAACTCACCGTATTTCATCGCCAAGAACATAACATTCAAAAACACAACCCCAGTTCCAGCACCAGGAGCAGTAGGGAAACAAGCAGTGGCATTAAGAATATCAGCAGACACAGCATCATTCTACGGATGCAAATTCCTAGGAGCACAAGACACATTGTATGACCATGTAGGAAGACATTATTACAAGGATTGTTACATTGAAGGCTCAGTGGATTTCATATTCGGGAACGCGCTGTCTCTGTTCGAGGGGTGTCACGTGCATGCAATAGCACAGAGGTTGGGGGCTTTAACAGCACAAGGAAGGAGCAGCATAATGGAGGACACAGGGTTCTCATTTGTGAACTGTAAGGTCACGGGATCAGGAGTAATATACCTTGGAAGGGCTTGGGGTCCATTTTCTCGTGTGGTTTTTGCTTACACTTACATGGACGACATCATCATTCCCAAGGGCTGGTATAACTGGGGCGACCCTAACCGTGAAATGACAGTATTTTATGGGCAGTACAAGTGTACAGGACCAGGAGCTAGCTTTGCTGGAAGAGTATCGTGGTGCAAAGAACTCACCGATGAGGAAGCTAAGCCTTTTATTTCCCTTGGCTTCATTGATGGTGATGAGTGGATCGGATTGTAG 1143 0.4471 MLISHCICFLLLLLLQNPSATLCHTKGLRPGRHTNSGLGLSTNRTQVENSEQQFTRWVNFVGSLKHSVFKTAKNKLFASYTLHVSKNPAVADFATIQEAIDSLPSINLVRVVLKVHAGVYTEKVNIPPMKSYITIEGAGADNTIVQWGDTAQTPGPRGQPLGTLYSATFAVNSPYFIAKNITFKNTTPVPAPGAVGKQAVALRISADTASFYGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQRLGALTAQGRSSIMEDTGFSFVNCKVTGSGVIYLGRAWGPFSRVVFAYTYMDDIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVSWCKELTDEEAKPFISLGFIDGDEWIGL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0743 380 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 73 378 - -
Lele46g0743 380 FunFam Pectinesterase 78 380 - -
Lele46g0743 380 Pfam Pectinesterase 91 375 IPR000070 GO:0030599|GO:0042545
Lele46g0743 380 ProSitePatterns Pectinesterase signature 2. 237 246 IPR033131 -
Lele46g0743 380 SUPERFAMILY Pectin lyase-like 78 379 IPR011050 -
Lele46g0743 380 Gene3D - 78 380 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0743 Lele-ChrLele46 5646210 5650786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0743 82 378 Carbohydrate Esterase AT1G05310 48.525 6.13e-103 308