Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0742 ATGGGAAGAGCGACAAGTTGGTTGAAGGGGTTGTTTGGGATCAGGAAAGACAGAGACAAAAAACAGAATTCAAACTCCAACCACCGCGGGAACTTCAAATCTGCGGCAGCACCACCACCACCATCCAATCTTTCACCTGCAGAGGCTGCTTGGCTTCAATCATTCTACGGAGAAACAGAGGACCAGCAGAACAAACACGCCATTGCCGTGGCAGCAGCCACCGCCGCAGCAGCCGACGCCGCCGTCGCAGCCGCCCAGGCGGCCGTGGCAGTAGTGAGGCTGACAAGTCACGGCAGAACCACCACCGTAGTCAGCCGTGGACACGAGAAATTGGCCGCCGTCAAGATTCAAACAGTATTCAGAGGATTCCTGGCAAGGAAGGCATTAAGAGCCTTTAAAGGATTAGTGAAGATTCAAGCACTTGTGAGAGGATTTATTGTTCGAAAGCAAGCAACTGCAACTCTTCACAGCATGCAAGCTCTGATAAGAGCTCAAGCCACAGTTAGATCTCATAAAGCTCGTCAATTCATCAACAAAAACGACGAATCATACAAATTCGAAACTCAAGCTCGAAGATCCACTGAGAGATTCGATGACAGTCGTAGGTTATCTTCTTCCTTCGACGCTTCCATGAATAACAACAACACTAACAGTAATGATGGAAGTCCGACACCAAAGATAGTGGAGGTTGACATGGGCGGCTGCCCGCCGAAGTCGAGCTCTCGCCGGAGCAACACATCAATGTCAGATTTTGGCGATGACCCTTCGTTCCAAACACTGTCTTCTGCACTCCCAGTTCCACAAATTCGAACCCCAGCTCGGATATCAATGGAAGATCGGAGGGTTTTGCCGGAGTCGGAGTGGGGATTAACAGGGGAAGAATGTAAGTTCTCTACAGCACAGAGCACTCCACGTTTCACGAATTCGTGTTCTTGTTCATCAATCGCCGCCACACCCAAAAGTGTCTGTGCAGAAAGATTGGTGTGGCAATATGGAAACCATCCGAATTACATGTCGAAAACTCAGTCGTCGAAGGCGAAATTGAGGTCTCGGAGTGCTCTGAAGCAACGACTGGAGTCCGGCGGAGCGAAGAAGAGGCTTTCTTTGAATGAAATGATGGAATCTAGGAGTAGTTTGAGTGGGGTTAGGATGCAGAGGAGTTGTTCAAAAGTTCAGGAAGCCATTAATTTCAAGAATGCTGTAATGGGGAAGATTGAGAGATCTGGAGAGATTGGGAGAGATGGTTACTACTTGCAGAGGAGGTGGTATGGTGATTGTTGA 1281 0.4895 MGRATSWLKGLFGIRKDRDKKQNSNSNHRGNFKSAAAPPPPSNLSPAEAAWLQSFYGETEDQQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRTTTVVSRGHEKLAAVKIQTVFRGFLARKALRAFKGLVKIQALVRGFIVRKQATATLHSMQALIRAQATVRSHKARQFINKNDESYKFETQARRSTERFDDSRRLSSSFDASMNNNNTNSNDGSPTPKIVEVDMGGCPPKSSSRRSNTSMSDFGDDPSFQTLSSALPVPQIRTPARISMEDRRVLPESEWGLTGEECKFSTAQSTPRFTNSCSCSSIAATPKSVCAERLVWQYGNHPNYMSKTQSSKAKLRSRSALKQRLESGGAKKRLSLNEMMESRSSLSGVRMQRSCSKVQEAINFKNAVMGKIERSGEIGRDGYYLQRRWYGDC 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0742 426 Pfam Protein of unknown function (DUF4005) 303 386 IPR025064 -
Lele46g0742 426 ProSiteProfiles IQ motif profile. 157 185 IPR000048 GO:0005515
Lele46g0742 426 MobiDBLite consensus disorder prediction 12 26 - -
Lele46g0742 426 Gene3D - 107 154 - -
Lele46g0742 426 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Lele46g0742 426 MobiDBLite consensus disorder prediction 187 203 - -
Lele46g0742 426 Pfam IQ calmodulin-binding motif 136 150 IPR000048 GO:0005515
Lele46g0742 426 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Lele46g0742 426 SMART iq_5 133 152 IPR000048 GO:0005515
Lele46g0742 426 SMART iq_5 108 130 IPR000048 GO:0005515
Lele46g0742 426 MobiDBLite consensus disorder prediction 238 266 - -
Lele46g0742 426 PANTHER IQ-DOMAIN 5-RELATED 1 371 - -
Lele46g0742 426 MobiDBLite consensus disorder prediction 1 44 - -
Lele46g0742 426 MobiDBLite consensus disorder prediction 187 270 - -
Lele46g0742 426 MobiDBLite consensus disorder prediction 204 224 - -
Lele46g0742 426 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0742 Lele-ChrLele46 5635799 5637265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0742 1 384 IQD Protein Family AT3G16490 48.111 4.34e-80 250