Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0739 ATGGCCTTGACTCTCTTTTCTGAGTCTTCATGCAAATTCGAGGATTGTACACTTGATGCTCAGATTCAGTCTCATCTGTATGATCAAGAGCATGCTATCTTACTCAACATAAAACAACACTTTCATCCATTACTCAATCAGTGGGCCCCATTGAATTCCTCTCATTGTTCTTGGCCTGGGATTATCTGCACCGATAACTCTGTCACCGATCTACATTTTGGTTACTTTAACATCACCGGAACGATACCACCTTTCATCTGTGACCTGAAAAATCTCACCTCTATTGATTTTCAGTATAATTACTTTTCTGGGGAGTTCCCGAAATTTCTCTATAACTGCTCCAAGCTTGAGCATCTAGATCTCTCTCAGAACAGTTTTGTGGGTCCGATTCCAAACGACATCGATCGGTTGGCCAACCTGCGTTTTCTTAGTCTGGGTGGCAACTATTTCTCCGGCGAAATTCCGGCGAGCATAGGAAGGTTAAAGGAGCTGAGAAATCTTCAACTTTACTGGTGTAAATTTAACGTCAGTGTCCCAGATGAAATAAGCGACTTGTCCAATCTTGAAGTCTTACACCTGAGTAAAAACTACGATCTGCCTCCTACCCAGTTCCCGTTGAGCTTCACCAAGTTGAAAAACGTGAAAAGCCTTTGGATGTTCTCCATGAATTTGATCGGGAAAATTCCAGAAAGTATTACAAAAATGGAGAGTTTGGAGGAATTGGATTTATGCCAGAATGGCTTAAGTGGGCAAATCCCCAGTGGTTTGTTTACTCTGAAGAATCTAAGCGTATTGCATCTTTGGAAAAACAAGCTATCTGGGGAATTACCGACAGAAATCGAAGCTTTGAATCTGACTGTGCTCGATGTTTCAAGGAATAATCTTACTGGGAAAATCCCAGATGGTTTTGGGAAGCTGAAAAACCTAACAGGTTTGAGTTTGGATATGAATCAACTATCAGGAGAGATACCTGAAAACCTGGCTCATCTACCGGCTCTTGTAGATTTCATGGTTTTTCAAAACAATCTCTCCGGTTCTCTTCCTTCTTACTTCGGTCGTTATTCGCCACTCGAAACCTTTCAGATTGCTTCCAATAGATTGACAGGAAAATTGCCAGAGGATTTATGTTACAATGGCAGGTTAGTTGGAGTAAGTGCTTTTGACAACAATCTAACTGGTGAGCTATCAGAATCGCTAGGGAGCTGCAATAGCCTGCAAGACTTCTTTCTTCAAAATAATAGTTTTTCTGGCGAAATCCCCGGCGGCCTTTGGACGTTATATAATTTGACGCTTTTAACGATCAACGACAACAAGTTCACTGGCGAGCTACCTCAAAGATTCGCTTGGAATCTTTCACGTTTGTACATAAGCAACAATGAATTCTCTGGTCGAATTCCAGAAGGAGTATCTACATTGAAGAATCTGGTTGAGTTTGAAGCTAGTAAGAATCTCTTCAATGGAAGTATTCCACGAGAGCTAACGTATCTTCCTAAGCTAACAAAATTGTTGCTTGATCAAAACCAGCTTACAGGGCCCCTTCCATCAGAATTCATATCTTGGAGTTCTCTCTATGCTCTAGATTTGAGCCACAATCAACTCTCTGGACAAATCCCGGATTCGATCGATTGTTTACAGGTACTTTCGGTACTAGACTTGTCAAATAATCAGCTATCAGGTCATGTTCCTCCTCAACTTGGTAAATTGTCAATGACACTCACAAACCTCAATCTCTCCAACAATCATTTCATTGGGAAGATTCCTAGTGAATTTGAAAACCTTGCTTATTCCCATAGCTTTCTCAACAATTCTGGTCTCTGTGCTGATATCAATCACCTAAACCTTCCCTTGTGCAATTCTGGTTCTGAGCTTCAAAGGTTAAACAAGAGATCATCTGTGTCACTTGCTTTGATCATAGGCCTACTGGTAGTGGCATCTTTAGCAGTTTTCTTGGTTTTACTCTTGATTTTCAGAGTATACAAGTCGAGAAAGCAAGAATTGGATACTTCATGGAAGTTGACTTCCTTTCAGAGGCTAAGTTTCTCGGGGATGAACATCGTGTCATCGTTGACGGATCATAATATTATAGGCCAAGGTGGGTATGGTACGGTATACCAAGTTGCTGTCGATGATTTTGGCTATGTCGCCGTGAAGAAGATATTGAGTAACAAGAAGTGGGAGCAGAAATTTGAGGATGCATTCCTAGCAGAAGTTAAGATTTTGAGCAACATTCGACACAAAAATATTGTGAAGCTCTTGTGTTGTATGTCAAACGAGGATTCTTTGCTGCTCGTGTATGAATATCTAGAAAACAATAGCCTTGATCGCTGGTTGAACAAAAAGAATAGGATAAACCATAATTTCGTTCTTGATTGGCAGAAAAGATTGGAGATAGCCATTGGAGCTGCACAAGGCCTGACCTATATGCACCATGATTGCTTCCCTCCCATCGTTCATCGTGATATCAAAACAAGTAACATCCTTCTAGATTCTGAGTTCAATGCGAAAGTCGCAGACTTCGGTCTTGCAAGATTGTTGATCAAGCCAAGCGAACTCACCATGTCAGGGGTAGCCGGATCATTTGGCTATATCGCACCAGAATATATTCAAACGACGAAAATCAATGAAAAGATTGATGTGTATAGCTTTGGGGTGGTGTTGCTGGAACTAACAACTGGAAAAGAAGCGAATCGCGGGGATGAACACTCATCTCTCGCGGAATGGGCATGGCGTCATGTGCAGTTGGGTGGTGATGCGGAAGAAGTTCTAGACGAAGAAATTAAGGAAGCATGCCATATGGATGCAATATGCCGTTTGTTCAAACTTGGGGTGATGTGTACTGCAATACTACCGGCTAGTAGGCCTTCCATGAAGGAGGTTCTGGAGATACTGATTCGTTGCCGGGACCGATATGGTGACAGGGAAAGGAGCCCTGAAATCTTTGATGTTGTTCCTCTGCTGAAGAATTCAAAGAGGGAAAGTAGATTGGATAGTGATGATGATTTATAG 3006 0.4172 MALTLFSESSCKFEDCTLDAQIQSHLYDQEHAILLNIKQHFHPLLNQWAPLNSSHCSWPGIICTDNSVTDLHFGYFNITGTIPPFICDLKNLTSIDFQYNYFSGEFPKFLYNCSKLEHLDLSQNSFVGPIPNDIDRLANLRFLSLGGNYFSGEIPASIGRLKELRNLQLYWCKFNVSVPDEISDLSNLEVLHLSKNYDLPPTQFPLSFTKLKNVKSLWMFSMNLIGKIPESITKMESLEELDLCQNGLSGQIPSGLFTLKNLSVLHLWKNKLSGELPTEIEALNLTVLDVSRNNLTGKIPDGFGKLKNLTGLSLDMNQLSGEIPENLAHLPALVDFMVFQNNLSGSLPSYFGRYSPLETFQIASNRLTGKLPEDLCYNGRLVGVSAFDNNLTGELSESLGSCNSLQDFFLQNNSFSGEIPGGLWTLYNLTLLTINDNKFTGELPQRFAWNLSRLYISNNEFSGRIPEGVSTLKNLVEFEASKNLFNGSIPRELTYLPKLTKLLLDQNQLTGPLPSEFISWSSLYALDLSHNQLSGQIPDSIDCLQVLSVLDLSNNQLSGHVPPQLGKLSMTLTNLNLSNNHFIGKIPSEFENLAYSHSFLNNSGLCADINHLNLPLCNSGSELQRLNKRSSVSLALIIGLLVVASLAVFLVLLLIFRVYKSRKQELDTSWKLTSFQRLSFSGMNIVSSLTDHNIIGQGGYGTVYQVAVDDFGYVAVKKILSNKKWEQKFEDAFLAEVKILSNIRHKNIVKLLCCMSNEDSLLLVYEYLENNSLDRWLNKKNRINHNFVLDWQKRLEIAIGAAQGLTYMHHDCFPPIVHRDIKTSNILLDSEFNAKVADFGLARLLIKPSELTMSGVAGSFGYIAPEYIQTTKINEKIDVYSFGVVLLELTTGKEANRGDEHSSLAEWAWRHVQLGGDAEEVLDEEIKEACHMDAICRLFKLGVMCTAILPASRPSMKEVLEILIRCRDRYGDRERSPEIFDVVPLLKNSKRESRLDSDDDL 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0739 1001 Gene3D Ribonuclease Inhibitor 199 339 IPR032675 -
Lele46g0739 1001 SMART LRR_typ_2 306 330 IPR003591 -
Lele46g0739 1001 SMART LRR_typ_2 185 206 IPR003591 -
Lele46g0739 1001 SMART LRR_typ_2 235 259 IPR003591 -
Lele46g0739 1001 SMART LRR_typ_2 496 519 IPR003591 -
Lele46g0739 1001 SMART LRR_typ_2 137 161 IPR003591 -
Lele46g0739 1001 SMART LRR_typ_2 544 568 IPR003591 -
Lele46g0739 1001 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 470 618 - -
Lele46g0739 1001 Gene3D Ribonuclease Inhibitor 136 198 IPR032675 -
Lele46g0739 1001 FunFam Leucine-rich repeat receptor-like protein kinase TDR 303 619 - -
Lele46g0739 1001 SUPERFAMILY RNI-like 323 614 - -
Lele46g0739 1001 FunFam Receptor-like protein kinase HSL1 isoform A 27 176 - -
Lele46g0739 1001 ProSiteProfiles Leucine-rich repeat profile. 522 544 IPR001611 GO:0005515
Lele46g0739 1001 Pfam Leucine rich repeat 284 343 IPR001611 GO:0005515
Lele46g0739 1001 Pfam Leucine rich repeat 91 149 IPR001611 GO:0005515
Lele46g0739 1001 SMART serkin_6 689 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0739 1001 SUPERFAMILY Protein kinase-like (PK-like) 679 963 IPR011009 -
Lele46g0739 1001 Gene3D Transferase(Phosphotransferase) domain 1 768 980 - -
Lele46g0739 1001 FunFam Kinase family with leucine-rich repeat domain-containing protein 768 978 - -
Lele46g0739 1001 SUPERFAMILY RNI-like 58 345 - -
Lele46g0739 1001 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Lele46g0739 1001 CDD STKc_IRAK 695 965 - -
Lele46g0739 1001 Pfam Protein kinase domain 691 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0739 1001 Pfam Leucine Rich Repeat 572 593 IPR001611 GO:0005515
Lele46g0739 1001 ProSiteProfiles Protein kinase domain profile. 689 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0739 1001 Gene3D Phosphorylase Kinase; domain 1 659 767 - -
Lele46g0739 1001 Gene3D Ribonuclease Inhibitor 29 135 IPR032675 -
Lele46g0739 1001 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 198 276 - -
Lele46g0739 1001 Gene3D Ribonuclease Inhibitor 340 619 IPR032675 -
Lele46g0739 1001 PRINTS Leucine-rich repeat signature 523 536 - -
Lele46g0739 1001 PRINTS Leucine-rich repeat signature 544 557 - -
Lele46g0739 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Lele46g0739 1001 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0739 Lele-ChrLele46 5615722 5618933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0739 30 1001 Receptor kinase-like Gene Family AT5G25930 50.911 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele46g0739 Pkinase 1.5e-50 CL0016