Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0737 ATGAGAAATTCAACTCCTTCCTTCTTCTTCCTTCTCCTTCTGAGCTCTGTGAATTCTCAGTCTGAACTTTATGATCAAGAACACGAAGTTTTACTGAGAATGAAGCAGTATTTCAAAAACCCATCTTCTCTCAGTCACTGGACACAATCATCATCATCATCTCATTGTTCATGGACAGAGATCACCTGCAACAATAACTCTGTTACAGGGTTGGCTCTGAAGAACATCAGTATCACCCAACCGATACCAACTTTCACCTGTGACCTTAAAAACCTCACTTCTATTGATTTACAATGGAATTTCATTCCTGGGGAATTCCCAACTTTTCTCTACAACTGTTCCATGTTGGAGTACTTGGACCTCTCTAATAATTACTTTGTTGGTAAGGTTCCAGAGGACATAGACCGATTGGGTAGCCTGCGTTTTCTTAATCTCGGCGGTAACAACTTCTCCGGCGAGATTCCGGCGAGCATTACGCGTTTAAAAGAGCTCACAAGTCTTCAGCTTAATCAATGTTTCTTTAATGGAACTATCCCAATTGAAATAGGCAAGTTATCCAATCTTGAAGTCTTGAATCTGGGCCTCAATTCATTCTCTCCTTCAAATCTTCCTTCTAGCTTCTTCACCAAGCTCACAAAATTGAAGGATCTCCAGATGTCGGACTGCAACTTGATCGGCGAAATCCCAGAAAGTATTGAGCAACTGGTGGACTTGGAGATGTTGGATTTATCCATAAATCAGTTAATTGGGAAAATTCCAAGTGGCTTGTTTATGCTGAAGAATCTAAGCATAATGTTTCTTTCAAGGAATCAGCTTAATGGTGAGCTACCTCAAGTGATTGAAGCCTTAAACTTGACGATCGTCGATCTCGCTCGGAACAACCTCACCGGGAAGATACCTAATAGCTTTGGAAATCTCCATAAGCTAACTGGTTTGAACTTTGGTCTTAATCAATTATCAGGTGAGATTCCAGAAAGCTTAGGCCGTCTTCACCGTATAATAGATTTCGGCGTTATCATGAACAATTTATCTGGCAATATTCCTTCTGAGTTTGGTCTTCATTCAAATCTCAGAAGATTTGAACTTGCATCAAACAGTTTCACTGGTAATCTTCCTCAGAACTTGTGTTACCATGGGAATTTATTTCGATTAACGGCTTACGACAACAAACTTGGTGGCGAATTACCAGAATCATTGGGAAATTGTAGGAGCTTGCTTGAGTTGAGGGTTTACAATAACGAGTTTTCTGGTGAAATTCCTAGAGGACTTTGGGAGTCTCAGAATTTGTCAACTTTCATGAACAATGACAATAAGTTCACAGGTGAGCTTCCTGAGAATTTGCCTGTGAACGTTTCACTCATGACGATTAGTTACAATCGGTTTTCGGGTCGAATTCCGAAAGGAATAGCTTCCATGAAGAATCTAGTTGTGTTTAAGGCAAGTAGCAATCTTTTTAATGGAAGTATTCCAATAGAGCTAACTAGTCTTTCTCAGTTATCAACTTTGTTGCTTGATCAGAACAAATTTTCTGGGCCATTTCCATCTGAAATTCTATCATGGAAATCTCTAAGAACTCTAAACTTGAGCCGAAATCTACTCTCCGGAGAAATCCCGGATTCGATCGGTCATTTGATTGATCTCGCGCAACTAGATTTGTCAGAAAATCAATTCTCTGGCCAAATTCCATCTCAAATAGCCTCTTCGAAACCTTCTGTTCTCAACCTTTCCTCGAATCATTTAACCGGGAAGATTCCGAGTGAATTCGAGAATCTTGCTTACGCCACAAGCTTCTTGAACAATTCTGGTCTTTGTTCTGATACAGCTGGATTAAACCTTAAATTCTGCAATTCTGGTAATTCTGTCCCTCGAAGCTCGAGCGATAAAGGTGGCTCATCATCTATGTCTCTTGGTTTGATCCTAGGCCTTGCTATGGTAGCCTGCATAGCAATTTTCTTCTTGTCATTTTTGTTGATGAGATTCTACCAAAAGAGAAAGCAAGAATTGGACACTTCATGGAAGTTAACTTCTTTCCAAAAGCTAAGTTTCACAGAATCAAAGATTGTCTCATCCATGACAGACCATAACATCATAGGTCGAGGAGGATACGGTATAGTTTACCGTATCGCCGTCAACGATAAGGACGACTACGTTGCCGTGAAGAAGATAAGCAATAACAGGAAATTAGATCATAAACTTGAGAATGCATTTTACGCTGAAGCTGAAATCTTGGGAACTATTCGTCACATTAACATAGTAAAATTGCTGTGCTGTATTTCTAATGAGGATTCTCTGCTTCTTGTTTATGAGTATTTGGAACATCGAAGTCTTGATAAGTGGCTACACAAGACGAATAATGGATCATCTGGTTTGTTATCATCTACTACAGTTCATAGTGTTGTTCTTGATTGGCCGAAGAGATTGAATATAGCCATCGGGATCGCGCAAGAACAACATGATACCATGTCATCTGTTGTTGGTTCTTTTGGTTATATTGCTCCAGAATATGCTCAAACGAAAAGAGTGAATGAGAAGGTTGATGTATATAGCTTTGGGGTGATCCTGCTGGAGCTGACAACAGGAAAAGAAGCTAACTATGGAGATGAACACTCGTCTCTTGCAGAATGGGCATGGCGTGAGATTCAACAAGGAAACAACATAGAACAAGTTCTAGACGAAGATCTTAAGGAAAATCCATGCTTGGATGAAATGTGCAGTTTCTTCAAGCTTGGAGTGATGTGTACAAGCAAAGAACCAGCTGGTAGACCAACCATGAAGGAGGTTCTGAATATAATGCTTCGCTTGAAAGGACCAGCTGGTTCTGCAGAAATCATGAATTTTGGTCATCTTGAGGTTGTTCCTCTGCTAAAGAATTCTAAGAGAGAGAGTAGGATAGATATTGATAATGATAGCTAA 2913 0.3992 MRNSTPSFFFLLLLSSVNSQSELYDQEHEVLLRMKQYFKNPSSLSHWTQSSSSSHCSWTEITCNNNSVTGLALKNISITQPIPTFTCDLKNLTSIDLQWNFIPGEFPTFLYNCSMLEYLDLSNNYFVGKVPEDIDRLGSLRFLNLGGNNFSGEIPASITRLKELTSLQLNQCFFNGTIPIEIGKLSNLEVLNLGLNSFSPSNLPSSFFTKLTKLKDLQMSDCNLIGEIPESIEQLVDLEMLDLSINQLIGKIPSGLFMLKNLSIMFLSRNQLNGELPQVIEALNLTIVDLARNNLTGKIPNSFGNLHKLTGLNFGLNQLSGEIPESLGRLHRIIDFGVIMNNLSGNIPSEFGLHSNLRRFELASNSFTGNLPQNLCYHGNLFRLTAYDNKLGGELPESLGNCRSLLELRVYNNEFSGEIPRGLWESQNLSTFMNNDNKFTGELPENLPVNVSLMTISYNRFSGRIPKGIASMKNLVVFKASSNLFNGSIPIELTSLSQLSTLLLDQNKFSGPFPSEILSWKSLRTLNLSRNLLSGEIPDSIGHLIDLAQLDLSENQFSGQIPSQIASSKPSVLNLSSNHLTGKIPSEFENLAYATSFLNNSGLCSDTAGLNLKFCNSGNSVPRSSSDKGGSSSMSLGLILGLAMVACIAIFFLSFLLMRFYQKRKQELDTSWKLTSFQKLSFTESKIVSSMTDHNIIGRGGYGIVYRIAVNDKDDYVAVKKISNNRKLDHKLENAFYAEAEILGTIRHINIVKLLCCISNEDSLLLVYEYLEHRSLDKWLHKTNNGSSGLLSSTTVHSVVLDWPKRLNIAIGIAQEQHDTMSSVVGSFGYIAPEYAQTKRVNEKVDVYSFGVILLELTTGKEANYGDEHSSLAEWAWREIQQGNNIEQVLDEDLKENPCLDEMCSFFKLGVMCTSKEPAGRPTMKEVLNIMLRLKGPAGSAEIMNFGHLEVVPLLKNSKRESRIDIDNDS 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0737 970 FunFam Receptor-like protein kinase HSL1 671 770 - -
Lele46g0737 970 ProSiteProfiles Leucine-rich repeat profile. 522 544 IPR001611 GO:0005515
Lele46g0737 970 ProSitePatterns Protein kinases ATP-binding region signature. 697 721 IPR017441 GO:0005524
Lele46g0737 970 Gene3D Ribonuclease Inhibitor 338 617 IPR032675 -
Lele46g0737 970 Gene3D Transferase(Phosphotransferase) domain 1 676 814 - -
Lele46g0737 970 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 179 276 - -
Lele46g0737 970 ProSiteProfiles Protein kinase domain profile. 691 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0737 970 Pfam Leucine Rich Repeat 572 591 IPR001611 GO:0005515
Lele46g0737 970 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515
Lele46g0737 970 Pfam Leucine Rich Repeat 522 544 IPR001611 GO:0005515
Lele46g0737 970 SUPERFAMILY RNI-like 284 592 - -
Lele46g0737 970 SUPERFAMILY Protein kinase-like (PK-like) 678 930 IPR011009 -
Lele46g0737 970 SUPERFAMILY L domain-like 25 283 - -
Lele46g0737 970 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 926 - -
Lele46g0737 970 FunFam Leucine-rich repeat receptor-like protein kinase TDR 303 617 - -
Lele46g0737 970 Gene3D Transferase(Phosphotransferase) domain 1 815 940 - -
Lele46g0737 970 Gene3D Ribonuclease Inhibitor 205 337 IPR032675 -
Lele46g0737 970 Gene3D Ribonuclease Inhibitor 24 204 IPR032675 -
Lele46g0737 970 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Lele46g0737 970 Pfam Protein kinase domain 693 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0737 970 Pfam Protein kinase domain 815 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0737 970 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Lele46g0737 970 SMART LRR_typ_2 137 161 IPR003591 -
Lele46g0737 970 SMART LRR_typ_2 89 113 IPR003591 -
Lele46g0737 970 SMART LRR_typ_2 235 259 IPR003591 -
Lele46g0737 970 SMART LRR_typ_2 185 210 IPR003591 -
Lele46g0737 970 SMART LRR_typ_2 520 544 IPR003591 -
Lele46g0737 970 SMART LRR_typ_2 306 330 IPR003591 -
Lele46g0737 970 FunFam Receptor-like protein kinase HSL1 isoform A 24 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0737 Lele-ChrLele46 5592373 5595971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0737 27 936 Receptor kinase-like Gene Family AT5G25930 48.595 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele46g0737 Pkinase 1.2e-12 CL0016