Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0731 ATGATGAATTATAAGGAGCTCTCCAGAAGCCGACAATGGACAAAGCAGCAGCCTCACATCAGACTAATAAAAAGCAAAAATATGAGTTCCCCAGAAAAAGATAGAGAGAAGAAGAAGATGATGAACAAGAGAGAGAGAGGTTCAATACTTGAGATTTTCAGATATGCTGAGTGGACTGATGTTGTGCTTATGTTGTTTGGTGCTTTGGGAGCAATAGGAGACGGCATGTCCACAAACGTTTTGCTTGTGTTTGCTAGCCGTATCATGAACAGCTTAGGTTATGGGAATTCTCAACAACAACAAAATAATGGTGGGAATAATTTTTCCATGGCCGAGGTTGAGAAGTGCAGTTTATATTTTGTTTACTTGGGATTAGCAGTCATGGCGTTGGCCTTCATGGAAGGTTATTGCTGGAGCAAAACAAGCGAGAGGCAGGTATTGAGAATTAGGTACAAGTATTTGGAAGCTGTGCTGAGACAAGAAGTGGGATTCTTCAATTCACAAGAAGCAACTACTTCAGACATCATAAACAGCATCTCAAAGGATACTTCTCTCTTCCAAGAACTTCTCAGTGAAAAGGTGCCTCTATTTTTGATGCATTCATCATCATTCCTCTCAGGGATTGCATTCTCAACGTATTTCTCATGGAGACTAGCCATAGTATCATATCCAACACTACTTCTTCTGATAATACCAGGAATGCTTTATGGGAAATACCTAATATACTTATCAAACAAGTCCCACAAAGAGTATAACAAGGCAAACGCCATTGTAGAGCAAGCTCTAAGCTCCATAAAGACAGTTTATTCCTTCACAGCAGAGAGAAGAATCATGGACAGATATTCAGCAATACTTGAGAGAATCTCAAAGCTTGGAATCAAACAAGGCATAGCCAAGGGCTTGGCTGTGGGAAGCACTGGTTTGTCTTTTGCTATATGGGCGTTTATGGCTTGGTATGGAAGTCGTTTGGTTATGTTCAAAGGTGAAAGTGGAGGAAGAATATATGCAGCTGGCATTTCCTTCATCATGAGTGGGCTATCACTTGGAGTTGCACTTCCTGATCTTAAGTACTTCACAGAAGCATCAGTTGCAGCATCAAGATTATTTGATATGATTGACAGAGTACCAACAATTGATAGTGAAGACACAAGAGGGCTTGTATTAGATTCCATAACTGGCAAGTTAGAATTTGAACAAGTGAAATTCACATACCCTTCACGTCCAGATACAATTGTTCTTAAGGATTTCAATCTCACAGTTGAATCTGGAACAACTGTGGCTCTTGTTGGTGCAAGTGGAAGTGGAAAGTCCACAGCAATTGGATTAGTGCAAAGATTTTATGATGCAGATGAAGGTTTTGTGAAGGTTGATGGTGTAGACATAAGAAGCCTTCAATTGAAATGGATAAGAGGAAAAATGGGACTTGTGAGTCAAGAACCAGCATTGTTTGGGACTTCAATAAAGGAGAATATTATGTTTGGGAAACAAGATGCTACTATGGAGGAAGTTATTGCTGCAGCCATGGCTGCCAATGCTCATAACTTCATTAGGCAGCTTCCTGAAGGTTATGAAACTAAAATTGGAGAAAGAGGGGCACTTCTATCAGGTGGACAAAAGCAGAGAATAGCAATTGCAAGAGCCATCATTAAGAATCCTGTGATTCTCCTACTTGATGAAGCAACTAGTGCTCTTGATTCTGAATCAGAACTTCTAGTTCAGAATGCACTTGATCAGGCCTCCATGGGAAGGACCACTTTGGTTGTTTCTCACAAGCTATCAACAGTTAGAAATGCAGACCTCATAGCAGTTGTCAATTGTGGCTGCATCATTGAAACAGGTACACACAATGAACTCCTCAACCGCGAAAATGGGCACTACGCGGAACTAGCAAAGTTGCAATTCAGTTGCGAAGAACAAGTGCAGAACCCGGACCAGATTGTTTCTTCTGTTGCAAGAAGCAGTACTGGTAGACCGAGTACTGCAAGATCAAGCCCTTCACTTTTCCCAAAATCACCATTATTGCCTGATACTACTACCCCACCACTCGAGTCTCACCCGCCACCTTCTTTACCGCGTCTTCTTTCTCTAAATGCTCCTGAATGGAAACAAGGTCTTGTTGGAAGCCTCTCAGCTATAGCCTTTGGTTCAATTCAACCCATATATGCTTTAACCATTGGGGGTATGATTTCTGCATTTTTTGTTGAGAGCCATGAGGAAATGAGTCATAGGATAAGAACTTATTCCTTTATTTTCTCTTCATTATCCCTTGCTTCTATAATTCTCAATCTCTTCCAACACTACAATTTTGCATATATGGGAGAGAAATTAACTAAGAGGATCAGATTACAAATGCTAGAGAAAATCTTAACCTTTGAAACTGCCTGGTTTGATGAGGAACAGAACTCTAGTGGAGCCTTATGTTCAAGGTTGAGCAATGAAGCTTCCATGGTGAAATCACTCGTCGCGAACCGCGTCTCTTTAATAGTTCAAACCACTTCTGCTGTCACAATTGCAATGATCATAGGGCTTATTGTGGCTTGGAAGCTTGCTCTTGTTATGATAGCTGTACAACCACTTACAATTCTTTGCTTCTATACAAGAAAAGTTCTTCTCTCAACACTTTCAACTAATTTTGTCAAGGCTCAGAATCATAGCACACAAATTGCAGTAGAAGCTGTTTATAATCATAAAATAGTGATTTCCTTTGGGAGCAACAAGAAAGTTGTACAACTATTCGATGAAGCTCAAGAGGCACCTAGGAAGGAAGCCAGAAAGAAGTCTTGGCTCGCCGGGATCGGGATGGGTTCGGCTCAGTGCCTAACTTTCATGACATGGGCTTTGGATTTCTGGTATGGTGGGAAATTAGTGCAGAAAGGAGAAATATCAGCAGGGGATGTATTCAAGACATTTTTTGTATTGGTGAGCACAGGTAAAGTCATAGCTGAAGCTGGAAGCATGACTTCTGATCTTGCCAAGGGTTCAGCAGCAGTAGCATCTGTTTTCACAATTCTTGATCGTCAATCATTAATCCCAAAGGGTGGGAATGGCAGTAATGGGTGCAAGTTATTGAAAATGAGAGGGAAAATAGAGATGAAGGATGTTGATTTTGCATACCCAAGCAGGGCAGGGACTCCAATACTGAGAAAATTTTGCTTGGAGGTGAAATCAGGAACAAGCATAGGAGTGGTAGGGAAAAGTGGGAGTGGGAAATCAACAGTGATAGCTTTAATTCAGAGATTCTATGATGTTCAAAGAGGCTCTATCAAAGTGGATGGTGTAGACATAAGAGAATTGGACATTCAGTGGTACAGAAAACACACAGCACTTGTTAGCCAAGAACCTGTAATATACTCAGGAAGCATAAGAGATAACATCTTATTTGGAAAACAAGATGCAACAGAAAGTGAAGTTGTTGAAGCTGCAAGAGCTGCTAATGCTCATGACTTCATTTCGTCACTGAAAGATGGGTATGAAACAGAATGTGGAGAAAGAGGAGTACAATTATCAGGAGGGCAAAAGCAGAGAATAGCAATTGCAAGAGCCATAATCAGAAACCCAACAATACTTCTGTTAGATGAAGCAACCAGTGCGTTAGACGTTCAATCAGAGCAAGTTGTACAAGAAGCACTTGATAGAATCATGGTGGGAAGAACTACCATTGTGGTGGCTCACAGGCTTAACACCATTAAAGAGCTTCAATCAATTGCTTATGTTTCAGACGGCAAAGTTCTTGAACAAGGAACCTATTCACAGCTTTGGCACAAGAAAGGCGCTTTCTTTAACCTATTCATAGATTTAGTCATGGATATATTACCTTAA 3819 0.4074 MMNYKELSRSRQWTKQQPHIRLIKSKNMSSPEKDREKKKMMNKRERGSILEIFRYAEWTDVVLMLFGALGAIGDGMSTNVLLVFASRIMNSLGYGNSQQQQNNGGNNFSMAEVEKCSLYFVYLGLAVMALAFMEGYCWSKTSERQVLRIRYKYLEAVLRQEVGFFNSQEATTSDIINSISKDTSLFQELLSEKVPLFLMHSSSFLSGIAFSTYFSWRLAIVSYPTLLLLIIPGMLYGKYLIYLSNKSHKEYNKANAIVEQALSSIKTVYSFTAERRIMDRYSAILERISKLGIKQGIAKGLAVGSTGLSFAIWAFMAWYGSRLVMFKGESGGRIYAAGISFIMSGLSLGVALPDLKYFTEASVAASRLFDMIDRVPTIDSEDTRGLVLDSITGKLEFEQVKFTYPSRPDTIVLKDFNLTVESGTTVALVGASGSGKSTAIGLVQRFYDADEGFVKVDGVDIRSLQLKWIRGKMGLVSQEPALFGTSIKENIMFGKQDATMEEVIAAAMAANAHNFIRQLPEGYETKIGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESELLVQNALDQASMGRTTLVVSHKLSTVRNADLIAVVNCGCIIETGTHNELLNRENGHYAELAKLQFSCEEQVQNPDQIVSSVARSSTGRPSTARSSPSLFPKSPLLPDTTTPPLESHPPPSLPRLLSLNAPEWKQGLVGSLSAIAFGSIQPIYALTIGGMISAFFVESHEEMSHRIRTYSFIFSSLSLASIILNLFQHYNFAYMGEKLTKRIRLQMLEKILTFETAWFDEEQNSSGALCSRLSNEASMVKSLVANRVSLIVQTTSAVTIAMIIGLIVAWKLALVMIAVQPLTILCFYTRKVLLSTLSTNFVKAQNHSTQIAVEAVYNHKIVISFGSNKKVVQLFDEAQEAPRKEARKKSWLAGIGMGSAQCLTFMTWALDFWYGGKLVQKGEISAGDVFKTFFVLVSTGKVIAEAGSMTSDLAKGSAAVASVFTILDRQSLIPKGGNGSNGCKLLKMRGKIEMKDVDFAYPSRAGTPILRKFCLEVKSGTSIGVVGKSGSGKSTVIALIQRFYDVQRGSIKVDGVDIRELDIQWYRKHTALVSQEPVIYSGSIRDNILFGKQDATESEVVEAARAANAHDFISSLKDGYETECGERGVQLSGGQKQRIAIARAIIRNPTILLLDEATSALDVQSEQVVQEALDRIMVGRTTIVVAHRLNTIKELQSIAYVSDGKVLEQGTYSQLWHKKGAFFNLFIDLVMDILP 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0731 1272 SUPERFAMILY ABC transporter transmembrane region 688 1005 IPR036640 GO:0005524|GO:0016020
Lele46g0731 1272 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 395 631 IPR003439 GO:0005524
Lele46g0731 1272 FunFam ABC transporter B family member 4 385 640 - -
Lele46g0731 1272 PANTHER ABC TRANSPORTER B FAMILY 26 717 - -
Lele46g0731 1272 FunFam ABC transporter B family member 1 51 391 - -
Lele46g0731 1272 CDD ABC_6TM_Pgp_ABCB1_D2_like 694 1010 - -
Lele46g0731 1272 Gene3D - 1020 1266 IPR027417 -
Lele46g0731 1272 CDD ABC_MTABC3_MDL1_MDL2 396 633 - -
Lele46g0731 1272 MobiDBLite consensus disorder prediction 1 24 - -
Lele46g0731 1272 FunFam ABC multidrug transporter SitT 1019 1266 - -
Lele46g0731 1272 MobiDBLite consensus disorder prediction 674 688 - -
Lele46g0731 1272 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 65 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0731 1272 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 705 992 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0731 1272 MobiDBLite consensus disorder prediction 649 689 - -
Lele46g0731 1272 MobiDBLite consensus disorder prediction 26 42 - -
Lele46g0731 1272 FunFam Putative ABC transporter B family member 8 676 1014 - -
Lele46g0731 1272 Pfam ABC transporter 413 562 IPR003439 GO:0005524
Lele46g0731 1272 MobiDBLite consensus disorder prediction 649 673 - -
Lele46g0731 1272 ProSitePatterns ABC transporters family signature. 1168 1182 IPR017871 GO:0005524|GO:0016887
Lele46g0731 1272 Gene3D - 385 638 IPR027417 -
Lele46g0731 1272 SUPERFAMILY ABC transporter transmembrane region 52 379 IPR036640 GO:0005524|GO:0016020
Lele46g0731 1272 SMART AAA_5 422 614 IPR003593 -
Lele46g0731 1272 SMART AAA_5 1056 1248 IPR003593 -
Lele46g0731 1272 MobiDBLite consensus disorder prediction 1 42 - -
Lele46g0731 1272 Pfam ABC transporter transmembrane region 68 332 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0731 1272 Pfam ABC transporter transmembrane region 709 975 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele46g0731 1272 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1029 1265 IPR003439 GO:0005524
Lele46g0731 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 634 IPR027417 -
Lele46g0731 1272 CDD ABC_MTABC3_MDL1_MDL2 1029 1262 - -
Lele46g0731 1272 Gene3D ABC transporter type 1, transmembrane domain 51 934 IPR036640 GO:0005524|GO:0016020
Lele46g0731 1272 CDD ABC_6TM_Pgp_ABCB1_D1_like 64 368 - -
Lele46g0731 1272 Pfam ABC transporter 1050 1196 IPR003439 GO:0005524
Lele46g0731 1272 ProSitePatterns ABC transporters family signature. 534 548 IPR017871 GO:0005524|GO:0016887
Lele46g0731 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1019 1263 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0731 Lele-ChrLele46 5515894 5526686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0731 103 640 Calmodulin-binding Proteins AT2G36910 36.765 1.40e-98 342