Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0726 ATGGCTGAGCCACTTAGCTCAGAGGCTGACACGTCGCCTTCATCGTCTCCTTTGTCACACTCATCATTACCCAACTCTTGTTTTTCTTCTTCGTCTACGTCATCATATTCGTCGTCTTCTTCTAAGAAGCTCAAGCGAGCCAGAGAAGATAGTAATAATAATGACAGCGAGCACCCTGTTTACAGAGGAGTCCGAATGCGAACGTGGGGCAAATGGGTCTCCGAAATCCGCGAACCCAGAAAGAAAAATCGGATCTGGCTCGGAACTTTCGCCAACGCCGAGATGGCCGCTCGTGCCCATGACGTCGCCGCCCTCAGCATTAAAGGAAGCTGCGCCATACTCAACTTCCCTGAGCTCGCCGCTTCCCTGCCCCGACCCGCCTCAAAATCGCCCAGAGATGTTCAAGCCGCCGCCGCCAAAGCTGCTTCCATGGAGATACTCAACATCAATCCCACCTCCACAACCTCGTCGTCGTCCTCCCCTCTGTCTTCCTCGTCCGGCGATGTTTCCACCCCAGAGGAACTAGGCGAGATAGTGGAGCTCCCATCACTGGGTACCAGCTTCCAAGAACCCGACCCGAATAATGATTTCGTGTTTTTCGATCCGGTAGATGGGTGGTCCTATCCTCACCCTTGGTATCATGGTGGGTATTTCACCAAATCAATGCAAGAAGAAGAAACAGAGGGTTTGATTCTTTGTGGCTTTGATGGCTCATTGTGGTAA 723 0.5214 MAEPLSSEADTSPSSSPLSHSSLPNSCFSSSSTSSYSSSSSKKLKRAREDSNNNDSEHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFANAEMAARAHDVAALSIKGSCAILNFPELAASLPRPASKSPRDVQAAAAKAASMEILNINPTSTTSSSSSPLSSSSGDVSTPEELGEIVELPSLGTSFQEPDPNNDFVFFDPVDGWSYPHPWYHGGYFTKSMQEEETEGLILCGFDGSLW 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0726 240 Gene3D AP2/ERF domain 60 118 IPR036955 GO:0003700|GO:0006355
Lele46g0726 240 FunFam Ethylene-responsive transcription factor 2 59 118 - -
Lele46g0726 240 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Lele46g0726 240 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 39 188 - -
Lele46g0726 240 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Lele46g0726 240 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Lele46g0726 240 MobiDBLite consensus disorder prediction 1 59 - -
Lele46g0726 240 MobiDBLite consensus disorder prediction 42 59 - -
Lele46g0726 240 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Lele46g0726 240 MobiDBLite consensus disorder prediction 7 41 - -
Lele46g0726 240 MobiDBLite consensus disorder prediction 150 173 - -
Lele46g0726 240 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Lele46g0726 240 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Lele46g0726 240 SUPERFAMILY DNA-binding domain 60 118 IPR016177 GO:0003677
Lele46g0726 240 MobiDBLite consensus disorder prediction 150 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0726 Lele-ChrLele46 5455195 5455917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0726 23 212 AP2-EREBP Transcription Factor Family AT5G11590 58.500 4.24e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele46g0726 AP2 6.3e-13 CL0081