Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0720 ATGAACAACCAACTGGGCTTTCATTTTCAACATCTTTTGGTTCTGTTTCTCATATTCTTCAGATTCCTTTCCTGTGAAGCACAGGTTTCAACTAGCGTTCCTTCTTCATCACAAGATGTTGTCACAAATTTCCGACCAAGTCTTGCTGTTGTCGTAGGAATTCTCAGTTTCATGTTCGTTCTAACATTCGGTTTCCTCATGTATATCAAGTGCTGTAACAGAGGAGCTTCATCATCAGTTCATGGGAACCCAGAAAGTCAACCTTGGCTTATCAGAACAACATCAACAAGATTCTCAGGAATCGACAAGACTGTCATAGAATCACTCCCTTTCTTCAGATTCTCTTCCTTAAAAGGATCAAAAGATGGCCTTGAATGTGCTGTTTGCTTGAACAAGGTTGATCCCCAAGATCACACCATTTTCACATATTCTAACAGCTTGAGACTGCTCATCAATGGTGGAGAAGAAGAATCCAACGTAGGGCTTTTTGTTCAGAGAGAGGAAGAAGAAGGAGAACAAAATAATGGGTTATCATCAACATTCAATTTTGGAAGCAGTTTTAGGAGAATCATGATGATGAAGGGTTCTTCAAATTCAAAAGAAGAAGAATTGCCTATTCAGAAACCAGTTCATGATCATGATGGTGATGATCACAGAAAGGTTTATCACAAGCTCAAACACAAGATTACTGTTTCAGACTTTGTTCTGCAGAATCGATGGAGCAATCTGAGTTCCTCGGATCTCATGTTCTTGAACTCAGAGATGATTGGTTCTACTTCGAGTTTAAGATTCAACAATGGTGGTGATCAGAGTCTGGTTATGATGAATCTCAAGGAGGAGATGGAGAGGACGGTTTCATTTGAGAATAAAGTTAGTGGTGTACTAAAGAACAACCTTAATTCTGCAGATGAGGGAAGAAGATCAGTATCAGATATAACTGGTGTCTCTAGATTTGGAGCTTTGGGGATGAAAAATGGTGGTAAGCTTAATGAAGGTTCATCATGTTTGGTTGATGGGATTCAGAACAATAATGTGAAAGAGGAAAAAGTGAGAAAGATTTGGCTGCCAATTGCCAAAAGAACAGTTCAATGGTTTGTGAACAGAGAAAAGAGGTTTCTGCAGCAACCTCTGACTTATGTATAG 1143 0.392 MNNQLGFHFQHLLVLFLIFFRFLSCEAQVSTSVPSSSQDVVTNFRPSLAVVVGILSFMFVLTFGFLMYIKCCNRGASSSVHGNPESQPWLIRTTSTRFSGIDKTVIESLPFFRFSSLKGSKDGLECAVCLNKVDPQDHTIFTYSNSLRLLINGGEEESNVGLFVQREEEEGEQNNGLSSTFNFGSSFRRIMMMKGSSNSKEEELPIQKPVHDHDGDDHRKVYHKLKHKITVSDFVLQNRWSNLSSSDLMFLNSEMIGSTSSLRFNNGGDQSLVMMNLKEEMERTVSFENKVSGVLKNNLNSADEGRRSVSDITGVSRFGALGMKNGGKLNEGSSCLVDGIQNNNVKEEKVRKIWLPIAKRTVQWFVNREKRFLQQPLTYV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0720 380 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 132 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0720 Lele-ChrLele46 5397131 5398387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0720 15 371 C3H Transcription Factor Family AT4G28890 37.150 2.43e-70 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0720 46 5397131 5398387 Lele48g0767 48 13007735 13013511 hybridization