LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele46g0717	ATGGAACGGATCGTCGGCGGCAAGTACAAACTCGGCCGCAAGATCGGGAGCGGATCCTTTGGCGATATTTACCTCGCTACTCATATCGATACTTTTGAGATAGTCGCGGTTAAAATTGAGAACACTAAAACTAAGCATCCACAACTGCTTTATGAGGCAAAACTGTATCATGTTCTTCAAGGAGGAAGTGGAATTCCTAGCATGAGGTGGTTTGGTGTAGACGGGGAGGACAATCTGCTAGTTATTGATTTGCTGGACCACTTTCTATCCGTTCATCTGAAAACTCTGGAAGCAAGAATTCTTCATCCTCGTCTAGTATTTGTCCAGCAAATTATAAATTCCGTGATAATCATGTTTGTGATGCTTATGCAATGTGATATTAACATTTCTTTTATGCAGATCACTAGAATAGAATGTGTTCATTCTAAGGGTTTTCTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCCAATCAGGTTTACATAATTGACTTTGGGCTTGCAAAACGATATCGGGATCCCACAACCAATCGTCATATTCCATACCGGGAGAACAAAAACTTAACAGGCACGGCACGTTATGCTAGCTGTAATACTCACCTTGGTATTGAGCAAAGCCGCCAGGATGATTTGGAGTCACTAGGATATGTGCTTTTGTATTTCCTTAGAGGAAGCCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAAAAGTATAATAAAATATGTGAAAAGAAAGTATCAACTCCTATTGAGGTCCTAAGCAAATCTCATCCTGTAGAGTTTGCCTCATACTTTCATCATTGCCACTCTTTGACGTTTGACCAACGACCTGATTATGGATTTTTGAAGCATCTATTTCGGGACCTATTTGCTCGACAAGGTGATTATGCTTTTCATCCTTTGAACAATGTGCAATCAAATGAATTGCAGAATTATGTTGATAGACCTTTGAAATGTTCTTCTTTCCAGTTTTTACCTCTGTCTTTATCTCTGCAATTAAGCGGAACTTCCATTGACAGTTTAGGGTTGATTTTCAACACAATAAATATAACCATGCTTTTGACAATGCTCAATTCTGGCATATCACAGCCAGCTCCTGGAGCAAGCAATAGTCATGCAATGCCAATGGGTGTTTATGCTTATTCAGGGGATGTCTCAGAGCACATTAGATCTGGAAATGCTACTGGTTCTGGTGTTAAGATGCAGTTTAAATCACCAGCAGGGAAAAATGTAGGTGTTATTAATCCTATTGACAAGAATATTTTTGAAGAAGCAAATATGCCTTCTACTTCATATTCACGTGCTGGTACCTCAAAAGGGAACTCCTTGAAGCCTGCCTTGACCACCGAAACTGCAAACCCTGGTCGTGGCCAAGGCAGTAAAATTGGTCCTTCAAGTAGCTGGAATTTCATCTCTGCAACGCATGTTGTGAAGGCTCTCAGCATATATTTGAAGCTGCAAATGTGTGGTGGTTTTGATATATATATTCCTCAAATGTTTGGTCAAAAATATTTTGGTGATTTACCAATGGAGACTGCAACTGTGCTGCAAAGTATGAAGCATCCTTGCAATTTCTTGTCAGTGACCAGGTTCTACAATTCCGTATCCCTTTTATGCACTTTGAAACCCTCAAGTGGAAGTTTTGAACCCTTGGAATCTGAGAATGAGTTTTCTGTGCCTAATTTCAGGGGAGAGCCACAAGGACAGTTTAGTGCTGGATCTGGGTAG	1752	0.4053	MERIVGGKYKLGRKIGSGSFGDIYLATHIDTFEIVAVKIENTKTKHPQLLYEAKLYHVLQGGSGIPSMRWFGVDGEDNLLVIDLLDHFLSVHLKTLEARILHPRLVFVQQIINSVIIMFVMLMQCDINISFMQITRIECVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRQDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYNKICEKKVSTPIEVLSKSHPVEFASYFHHCHSLTFDQRPDYGFLKHLFRDLFARQGDYAFHPLNNVQSNELQNYVDRPLKCSSFQFLPLSLSLQLSGTSIDSLGLIFNTINITMLLTMLNSGISQPAPGASNSHAMPMGVYAYSGDVSEHIRSGNATGSGVKMQFKSPAGKNVGVINPIDKNIFEEANMPSTSYSRAGTSKGNSLKPALTTETANPGRGQGSKIGPSSSWNFISATHVVKALSIYLKLQMCGGFDIYIPQMFGQKYFGDLPMETATVLQSMKHPCNFLSVTRFYNSVSLLCTLKPSSGSFEPLESENEFSVPNFRGEPQGQFSAGSG	583

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele46g0717	583	MobiDBLite	consensus disorder prediction	441	469	-	-
	Lele46g0717	583	Pfam	Protein kinase domain	9	248	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele46g0717	583	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	145	157	IPR008271	GO:0004672\|GO:0006468
	Lele46g0717	583	Gene3D	Transferase(Phosphotransferase) domain 1	119	310	-	-
	Lele46g0717	583	FunFam	CK1/CK1/CK1-D protein kinase	120	309	-	-
	Lele46g0717	583	ProSitePatterns	Protein kinases ATP-binding region signature.	15	38	IPR017441	GO:0005524
	Lele46g0717	583	Gene3D	Phosphorylase Kinase; domain 1	1	85	-	-
	Lele46g0717	583	ProSiteProfiles	Protein kinase domain profile.	9	295	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele46g0717	583	MobiDBLite	consensus disorder prediction	560	583	-	-
	Lele46g0717	583	SMART	serkin_6	9	299	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele46g0717	583	PANTHER	CASEIN KINASE-RELATED	7	393	-	-
	Lele46g0717	583	SUPERFAMILY	Protein kinase-like (PK-like)	4	302	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele46g0717	Lele-ChrLele46	5360977	5367422	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele46g0717	9	265	AGC Kinase Gene Family	AT3G08720	25.379	2.84e-12	67.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Lele46g0717		Pkinase	1.1e-21	CL0016