Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0712 ATGTGTATTCGGCGTCAACCTTTTGTACTAATCTGTATCTACATTAGATACACGAGGACTACTTTTTCTGTATTATTAGCAATGGGGGGGAAAAAAGCCGAAGCAATGGCTCCAAAAAGAGGTGTGAAAGCTCCGGTTGTGGCTGCTAAGAAGAAGCAGGACAAGGTGGTGAACCCGCTATTTGAGAAGCGTCCGAAGCAGTTTGGGATTGGAGGTGCATTGCCTCCTAAGAGAGACCTAACACGATTCGTCAAGTGGCCTAAGACAGTTCAAATCCAGAGGAAGAAGAGAATTCTCAAGCAAAGGTTGAAGGTCCCTCCAGCTTTGAATCAGTTCACCAAGACACTCGATAAGAACCTTGCAACTAGCCTATTTAAGATGCTCCTTAAGTACAGGCCTGAGGATAAAGCTGAGAAGAAAGAGCGACTCTTGAAAAGGGCCCAAGCAGAGGCAGAAGGAAAATCTACTGAAGCTAAGAAGCCTATTGTTGTGAAATACGGTCTCAACCATGTCACGTACCTTATTGAGCAGAACAAGGCACAGCTGGTCGTGATTGCGCATGATGTAGATCCAATTGAATTGGTTGTGTGGCTGCCAGCATTGTGCAGAAAGATGGAAATTCCCTACTGCATTGTCAAGGGCAAGGCACGCTTGGGAACGATTGTCCATAAGAAAACTGCTTCAGTTCTGTGCTTGACAACAGTCAAGAATGAAGACAAACTAGAATTCTCCAAGATTCTAGAGGCAATCAAGGCCAACTTCAACGACAAGTACGATGAGTACAGAAAGAAGTGGGGTGGCGGAATTATGGGATCTAAATCCCAAGCCAGGACCAAGGCCAAGGAAAGGCTCCTTGCCAAGGAAGCGGCACAGAGAATGTCTTGA 885 0.4576 MCIRRQPFVLICIYIRYTRTTFSVLLAMGGKKAEAMAPKRGVKAPVVAAKKKQDKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKSTEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0712 294 SUPERFAMILY L30e-like 124 265 IPR029064 -
Lele46g0712 294 Coils Coil 137 157 - -
Lele46g0712 294 PRINTS Ribosomal protein L7A family signature 253 273 IPR001921 -
Lele46g0712 294 PRINTS Ribosomal protein L7A family signature 65 82 IPR001921 -
Lele46g0712 294 PRINTS Ribosomal protein L7A family signature 102 121 IPR001921 -
Lele46g0712 294 PRINTS Ribosomal protein L7A family signature 221 245 IPR001921 -
Lele46g0712 294 PRINTS Ribosomal protein L7A family signature 82 99 IPR001921 -
Lele46g0712 294 PRINTS Ribosomal protein L7A family signature 126 139 IPR001921 -
Lele46g0712 294 PRINTS Ribosomal protein L7A family signature 160 180 IPR001921 -
Lele46g0712 294 ProSitePatterns Ribosomal protein L7Ae signature. 202 219 IPR004037 GO:0042254|GO:1990904
Lele46g0712 294 PRINTS Ribosomal protein L7A/RS6 family signature 199 209 IPR018492 -
Lele46g0712 294 PRINTS Ribosomal protein L7A/RS6 family signature 183 196 IPR018492 -
Lele46g0712 294 PRINTS Ribosomal protein L7A/RS6 family signature 209 223 IPR018492 -
Lele46g0712 294 PRINTS Ribosomal protein L7A/RS6 family signature 164 178 IPR018492 -
Lele46g0712 294 Gene3D - 86 269 IPR029064 -
Lele46g0712 294 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 152 241 IPR004038 -
Lele46g0712 294 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 78 270 - -
Lele46g0712 294 FunFam 60S ribosomal protein L7a 86 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0712 Lele-ChrLele46 5310203 5313545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0712 36 294 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 85.714 4.39e-168 464