Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0708 ATGATGGCCGCCGGAAACCCTAATTGGTGGAACATAAATAATACTATGAGGCCTCCTATTTCTCATCATCATCAACAACAACCACCTAATTCTAATTCTTCTTCTCCTTTCTTCTTCTCATCATCATCCACTAACTTCCTCTCTCCTAATTATCCACCATCTTCTTCCCTTCCTCTTCCTTTTCCTTCTACTTGGCATGGAATTCCAGATCACCTTCCTCAGTCCTGGAGCCACCTTCTCTTGGGTGAAGAAGATAAGAAAATGGGGAACTGGGAGGAGCAAGTGCTGATGAGTCAGGCTCAAAATGTTGGTCTTGTGGATGTCAAGCAAGAGAGCTCATCCATAAACAGTTATGTGTATGGCGGTGGTGGTGCTGGTGACGGCAAAAACAGTAACGAGGAGTTTCAGGTGGCTTCGGCCGGTGGTGGGGGTGGTGCTGTTGCTAATTGGTCTCATCATCAAATAGTGCCTCCTCCTCCTCCTGCTGCTTCATCTTCGTCCCCAAAATCATGTGTCACAAGTTTCAGCAGTAACATGTTGGATTTCTCTAACACTAAGACAGATGCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTTTAACAGCAATGGAGGTGGTGGCGGTGGGCCAGTGAAGAAAGCTAGGGTTCAACCATCAACGACGACACAGACACAGTCAAGCTTCAAGGTTAGAAAGGAGAAATTAGGTGACAGAATTACTGCCCTTCATCAGATTGTTTCCCCCTTTGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATACATCAGATTCCTCCAGAGTCAAATTGAGGCCCTTTCCTCACCATACTTGGGCACTACTTCTGCATCATCTTCTTCAAACATGAGGCACCAACACTATGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACTCTGGTCAGGAACTAGAGGAAGAACCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTTCCAGTTTCATGCACACTTCAAATTGGTAGGGATAATGGAGCTGATTACTGGGCTCCTGCTCTTGGAGGAGGAGGCTTTCGATGA 1071 0.4585 MMAAGNPNWWNINNTMRPPISHHHQQQPPNSNSSSPFFFSSSSTNFLSPNYPPSSSLPLPFPSTWHGIPDHLPQSWSHLLLGEEDKKMGNWEEQVLMSQAQNVGLVDVKQESSSINSYVYGGGGAGDGKNSNEEFQVASAGGGGGAVANWSHHQIVPPPPPAASSSSPKSCVTSFSSNMLDFSNTKTDARHPPPDRSSEFNSNGGGGGGPVKKARVQPSTTTQTQSSFKVRKEKLGDRITALHQIVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLGTTSASSSSNMRHQHYVQGEKNCIFPEDSGQELEEEPKKDLKSRGLCLVPVSCTLQIGRDNGADYWAPALGGGGFR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0708 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 219 268 IPR011598 GO:0046983
Lele46g0708 356 MobiDBLite consensus disorder prediction 13 36 - -
Lele46g0708 356 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 34 336 - -
Lele46g0708 356 CDD bHLH_AtbHLH_like 227 276 IPR045239 -
Lele46g0708 356 MobiDBLite consensus disorder prediction 182 231 - -
Lele46g0708 356 MobiDBLite consensus disorder prediction 215 229 - -
Lele46g0708 356 Gene3D - 227 285 IPR036638 GO:0046983
Lele46g0708 356 MobiDBLite consensus disorder prediction 146 170 - -
Lele46g0708 356 FunFam Transcription factor bHLH123 family 229 295 - -
Lele46g0708 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 229 280 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0708 Lele-ChrLele46 5250981 5254744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0708 1 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 39.062 5.15e-59 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0708 46 5250981 5254744 Lele47g0737 47 13641494 13646066 hybridization
Lele46g0708 46 5250981 5254744 Lele48g0777 48 13134665 13138399 hybridization