Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0698 ATGGGGGAAGGTGAGGGGGGAGATTGCCCTCCGAAGAATGTGTCATCGGATGCTACAGGAGCAGCGTTGCCGTCGGATGTTCCGGCAAAGAAGCTTGCGAGGCAGCTCGATTTCACGGGTTATAGTGGTGCGGCCTTGCCTGAACACCCCCAGCCGCAGTCGCAGCCTCAGTCGCAGACGGTGGTGCAGAGTCAGCCGCAGCCACGCCCAGTTACAATGCAACCGGTTGTTTTGATGCCTATGCCACCGCAGGCGCCTCATTCTTCAGCAAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCCAACTTTGATATGAAGGATGTTACTCCTAAGAAACAAAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGTTATATTGTGAATGTTTTGCATCGGGAATATATTGTGACGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACACGATAGCAGGGAGGATGCTGGTGAAATTTTAATACTAGGAAAGCACAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCATTTATCCAGCAGGCAGCAAATGCTGCCATAACCGGAGCAATTGGATCTTCTGGTTATGCATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAACTCTTCTTTGGGCCAACAACAAAGGATACGTCTGTAGGCAGGCTTGGCCAATTTCAACAGGCAAACCATATCAAAAGTCCTGCACCCTCCTCATCCTTGTCTCCTGTCCATGGTACCCGTGTTGGAACTGCAGCATTAGGGCCTTCTAAATTTACATACAGATCCCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAGCTTTGCTCCGTCCTGGTGCTAGTATCAGGACAAGCTGCAAAGTCTCTTACAGACCAGAAAATGCGGATGGAAAAGAATGCAGAAGATCAGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGATTGTTCAAGTGCAAACCAAACAGATAAAATCAGCCCAGATAATTCTAGTTCAGATGGGGCTGTTGCCCCAAAAAGCAGGCCAATGTCTCCTGGAACCTTAGCCTTGATGTGTGATGAGCAAGATACATTGTTCATGACAGCTCCATCCCCTAATGGTTCAATGAATCACGCTTGCAATACGTCTTTACGTTCTCCTTATGGACAAGGCATGACAGAGGTTTATGCAGAGCAAGAAAGGATTGTTTTGACGAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGACTTAGAGACTCAGAAAGAGGCAATCAACAATGGCAGTGGAAATGCTGGTGCTGAAACGGCGCATCAGCCAGTAGCCACCAGTAATGGAGTTGCCAATGCTGTTGTGCCACCCATGATGGCCTCTAGCATGAACATGATCGTTTCAGAGGTTCCTGGTAATCTTGTCCCTGAAAATGGGGAAAGTAAAGCCCAAGATTGA 1770 0.4571 MGEGEGGDCPPKNVSSDATGAALPSDVPAKKLARQLDFTGYSGAALPEHPQPQSQPQSQTVVQSQPQPRPVTMQPVVLMPMPPQAPHSSARVGKPESPKSRSRPNFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTHDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAFIQQAANAAITGAIGSSGYASPPVSKKRKGQELFFGPTTKDTSVGRLGQFQQANHIKSPAPSSSLSPVHGTRVGTAALGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKSLTDQKMRMEKNAEDQVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQTDKISPDNSSSDGAVAPKSRPMSPGTLALMCDEQDTLFMTAPSPNGSMNHACNTSLRSPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSDLETQKEAINNGSGNAGAETAHQPVATSNGVANAVVPPMMASSMNMIVSEVPGNLVPENGESKAQD 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0698 589 MobiDBLite consensus disorder prediction 378 446 - -
Lele46g0698 589 Coils Coil 149 169 - -
Lele46g0698 589 MobiDBLite consensus disorder prediction 94 111 - -
Lele46g0698 589 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Lele46g0698 589 MobiDBLite consensus disorder prediction 386 400 - -
Lele46g0698 589 PANTHER TESMIN/TSO1-RELATED 48 511 IPR028307 -
Lele46g0698 589 Coils Coil 369 389 - -
Lele46g0698 589 MobiDBLite consensus disorder prediction 48 71 - -
Lele46g0698 589 MobiDBLite consensus disorder prediction 414 436 - -
Lele46g0698 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Lele46g0698 589 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Lele46g0698 589 MobiDBLite consensus disorder prediction 1 111 - -
Lele46g0698 589 SMART CXC_2 114 154 IPR033467 -
Lele46g0698 589 SMART CXC_2 199 240 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0698 Lele-ChrLele46 5162947 5172293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0698 1 526 CPP Transcription Factor Family AT4G29000 56.810 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele46g0698 TCR 3.1e-12 No_clan