Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0690 ATGGGAGTCACTGACCTTCCTCTTCTGCTTCTGAAAAGCTTTTGCTTCTGTGGCACTACGCTGCTCCATGTAATATCCCCTCGGGACCCAGTCATGTACAGATCATTCATGACATGTGATGATCCAAAAGGAGTCGTGGAATGCGGGGCAATCAGAAAGTCCAGGGCTGGATCACAGAAGATGAAGGACAAGATGAATAGTCACAGGAGGACAGCTGAGAAATCTGAAGCATCTTTGTCAAAAAAGTCAGACAGAGAAGAAATGGTCCCAAAAGGATCATCTCAAAGTTCTGTGGATCCATCTTCCTTGCAGCTTATGGAGGTCTCTAGAGGTGCTCAAAGGTTGAACAATATGATTGATACATGGTCTAGGGATATGAGATATAATGGAAGGTCTGGAGATATTGCAAAAGATTTGTTGAAAGGAGCTCTTGATCTACAAGACTCTCTAGTCGTGCTTCGGAAGTTGCAAGAAGCTTCACAGCACAAGTCCTGTTTGAAGAAAAAACAGAATGAGAAACCTGAAAGAGGAAGAATTGATGCAAAGATGATGGATGGAACATACACTAATAACCAATTTAGCGAACAAAGTTATTCAATGGGATTTGAAAGACCTCGCCGTTCTGCTGATGGTTCTTCAAGAAATTGCACAGAGGACCTTAAGAAAGTGATCAAAGACAGTCTGATTAGGCAAAATCTGTTTACGATGCCAAGTTCTGAAGGATTAGATTCTGCATCAGAAATTCCCTCAACAAGCTCAAGCCAATCTTCTGGGGTTCATACTGATAGGCTTTCTGATTCGTCTTTTTCATCAGGCACTTCAAAGGTGAGAGGAACCAGTTTAGTTGCCAAGCTAATGGGTTTAGAAGAAGCCCCTTCAAGACCATTTCCAGCTGCTGCGCAGAAACAGTTGCAGGGTGAAAAAATTCTGAATCAAAAGAGACCCACATTTGAGATAGATATACCCAAGTTAAAAAGGACCAGTTCTATAATTGAGAAGGTTGATCCAGAACGAAAGAAGACCCTGAGTGAAATTCTTGAGACTATTTATTTCAAAGGACTCTTGAAGAAGAGTTCTGTCTTAGAGCCTAATCTCTGTATTCGTCATTCCAATGATTACCATCCCAAACAATGTGATAATTTACCTCCAATTGTACTCATGAAACCTCGATATAGTTCATACCAGGAATCGGTTAAATCCCACGCACTTGTTCCTCCAGATCCAGAAGGTCTGTCCCTTAGAAAACCAAAAGCAGAGGTAGTCCCTTCCAAATCAATCAAACAAAAAGGGTCCACCAGCATGGGGGGCAGAGCAGAGGATGTGACCAAAAGGCTTAGACATGAGGAAAAGCCTAAAATCCTCAAAGAGTTCGTGAAACTGGATGAGAAAGCAATCATGCCCATTGAAACGTCTCCATATATGGTGAAATCCTATAGTCATGTAAGTCATAAACCACAGGTACAGGAGGCAATTGAGAAAAAAGCTAGGGTGAAAACTGTTACCAGAAAGCTGCCAGAAAAGGAGATCTCAAAACCTAAAATTTTGACAAGGTCCCAAGATCGAGGAGAAATTACCTCCACAAAGTTGAGGACACCACCTGGTGAATTGACCATAATCAAGAATGAGATTCCCTCGCAGCAGAGCACAGCTTTGATCATCAGCCCAAAAACAAAAACAACAAAGCATAAGAATTTCAAACTGAGAAAGAATCAGAATAATAGCCAGAAGCTTATTCCAGAGCCTGAAGCAGCTAAACCAGTTGATGAACAATCAGTAGGCGAAGAAGAGAAGAGTATTGTTGTTCCTTGTGAAGATGATTGCACTGAGATTAGAACTATAGTGGAACATGCAGTTGAATTTTCAGTTGAACGTGAAGTAGATGCCTCCACGAGCAAGATGGATGAAGATTGTTATCAGAGCCTGAACTCTTCAAGTAATGATGTTGCACCGCTAAAGGTTGAACACGAAATTGATGCTACTTCTGCTGAAGAAGCTCGTGACGGGAACAATGGTGGGGAGACAGATAGCAAGGCTGACAAAGAAGGGGCTGAGCTGAAATATTTTCTTTTAACCAACCCATTGTTTGTTGGCCATGCAGAGGAGCTCCTGAATCTTGATGTGGATTGTCTCATGACCCTGCAAAAATATGAAAGCAATGGGATAGCCAATCCCAGACTCTATTTGGATTGTGCAAATGAACTCGCTGAGCGTAAAAGCCTGCAAGATTCACAAATGGTTCATCCAATCCTGCTAACTCGAGCAGGGAACTCAAGATTACAGATCTCTTTAGGCAGGTTGGTTGAAGAAATCTATAATGCCATTGAGAAGCTGAAGTTTTACACTATGATCACTGGGGAGAAATTCTCTGTAGATAATATCTATGCAATGATGAAAAGTGATATAAAGTGCCATGGGCTGATAAATGGAATATGGGACTGGGGTTGGAGGTATGGATTTTCTGCAGATGAATCTGAGCAAGTTGTCAACGAAGTAGAGAGCCTAGTTTTAAGTGGGTTGATTGAAGAGCTTATTGTGGATTTATAG 2544 0.4163 MGVTDLPLLLLKSFCFCGTTLLHVISPRDPVMYRSFMTCDDPKGVVECGAIRKSRAGSQKMKDKMNSHRRTAEKSEASLSKKSDREEMVPKGSSQSSVDPSSLQLMEVSRGAQRLNNMIDTWSRDMRYNGRSGDIAKDLLKGALDLQDSLVVLRKLQEASQHKSCLKKKQNEKPERGRIDAKMMDGTYTNNQFSEQSYSMGFERPRRSADGSSRNCTEDLKKVIKDSLIRQNLFTMPSSEGLDSASEIPSTSSSQSSGVHTDRLSDSSFSSGTSKVRGTSLVAKLMGLEEAPSRPFPAAAQKQLQGEKILNQKRPTFEIDIPKLKRTSSIIEKVDPERKKTLSEILETIYFKGLLKKSSVLEPNLCIRHSNDYHPKQCDNLPPIVLMKPRYSSYQESVKSHALVPPDPEGLSLRKPKAEVVPSKSIKQKGSTSMGGRAEDVTKRLRHEEKPKILKEFVKLDEKAIMPIETSPYMVKSYSHVSHKPQVQEAIEKKARVKTVTRKLPEKEISKPKILTRSQDRGEITSTKLRTPPGELTIIKNEIPSQQSTALIISPKTKTTKHKNFKLRKNQNNSQKLIPEPEAAKPVDEQSVGEEEKSIVVPCEDDCTEIRTIVEHAVEFSVEREVDASTSKMDEDCYQSLNSSSNDVAPLKVEHEIDATSAEEARDGNNGGETDSKADKEGAELKYFLLTNPLFVGHAEELLNLDVDCLMTLQKYESNGIANPRLYLDCANELAERKSLQDSQMVHPILLTRAGNSRLQISLGRLVEEIYNAIEKLKFYTMITGEKFSVDNIYAMMKSDIKCHGLINGIWDWGWRYGFSADESEQVVNEVESLVLSGLIEELIVDL 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0690 847 MobiDBLite consensus disorder prediction 401 440 - -
Lele46g0690 847 MobiDBLite consensus disorder prediction 56 103 - -
Lele46g0690 847 PANTHER OS01G0228800 PROTEIN-RELATED 29 847 - -
Lele46g0690 847 MobiDBLite consensus disorder prediction 659 678 - -
Lele46g0690 847 MobiDBLite consensus disorder prediction 238 274 - -
Lele46g0690 847 MobiDBLite consensus disorder prediction 569 598 - -
Lele46g0690 847 MobiDBLite consensus disorder prediction 56 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0690 Lele-ChrLele46 5111882 5115968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0690 685 844 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 31.548 2.74e-18 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0690 46 5111882 5115968 Lele47g0747 47 13799178 13802013 hybridization
Lele46g0690 46 5111882 5115968 Lele48g0790 48 13242063 13246999 hybridization