Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0684 ATGTCAGCGACGCCTTCCCCCGGAGCTGCTCCAGCGCCCACGTCGCCGCCGGCTCCGGCGACTAACAATACTTCTCCTCCGCCCAGCCCTTCTGCTCCTCCACCGTCCACCCCGGCCTCACCGCCGCCAGCTACACCCTCTGCTCCACCGCCGGCGACTCCTTCGGCTCCTCCTCCAGCCCCAGCTACACCTTCTCTGAGCCCTCCTTCTACTTCCCCTCCATCCCCTCCATCCCCCCCATCAACCTCAACACCACCAGAATCTTCAGCGTCGCCTCCTCCACCGTCCAGTACCAACACTCCGCCGAGTCCTCCGAGTCGCAGCTCGCCGACTCCTCCGTCGAGCTCAACTTCGCCTTCGACTCCAAATCGAAGTCCGCCGCCACCGTCTTCAAAATCGTCGCCGTCTCCATCTTCGTCATCGTCCTCATCGAATAATATATCGACTGGGGTTGTTGTCGCCATTGCCGTCGGGGCTGTGGCGGTTCTTCTTGTGCTGAGTATTCTCTGCATTTGCTGTAGGAAGAAAAAGAGAAGACGTGATGAGGAATACTATGTGCCGCCGCCGGTACCGCCTCAGGGACCCAAAGTTGATCTATATGGTGGCCCACAGCGTCAATGGCAACACAATGCTCCCCCTCCTTCAGATCATGTAGTATCTGTAATGCCAAAGCCATCGCCCCCACCGCCACCAGTTGCATCAAGGCCTGCCCACTTACCTGTTTATGCTCCTCAACCTCCACCGCCACCACCACCTTTCATAAGCAGCAGCGGTGGGTCTGGGTCTAACTATTCAGGCGGTGAAACCATTCTTCCCCCGCCATCTCCAGGCTTTGCACTGGGTTTCTCAAAGAGTACATTTACATATGAGGAGCTGGCCCGGGCAACAGATGGCTTCTCAGATGCCAACCTCCTTGGACAAGGTGGATTTGGTTATGTGCACAGAGGCATTCTTCCGAATGGAAAGGAAGTGGCTGTGAAGCAGCTTAAGGCTGGAAGTGGGCAGGGGGAGCGTGAGTTTCAAGCTGAAGTCGAGATCATTAGTCGGGTTCATCACAAGCATCTTGTTTCTTTGGTCGGATATTGCATTACTGGGACACAGAGGTTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAGTTTCACTTGCATGGAAAAGGAAGGCCTACCATGGACTGGCCCACAAGACTAAAAATTGCTTTAGGATCAGCAAAAGGATTAGCGTATCTTCATGAGGACTGTCATCCTAAGATCATCCACCGTGATATCAAAGCCGCTAACATACTCCTGGATTTTAAGTTTGAAGCAAAGGTGGCAGATTTTGGACTTGCAAAGTTTACATCTGATGTTAATACTCATGTTTCCACTCGGGTGATGGGGACATTTGGTTACCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACAGACAAATCAGATGTTTTCTCCTTTGGAGTCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTTGATTCAAATCATACATTTATAGAGGATAGTTTGGTAGACTGGGCAAGGCCTACGCTCACTCGTGCATTGGAAGATGAAAATTTTGATTCAGTGGTTGATCCAAGACTCCAACATGAATATGACCCCAATGAGATGGCTCGTATGGTGGCTTGCGCTGCAGCTTGCATACGGCATTCAGCAAAGCGCAGGCCAAGGATGAGCCAGGTTGTTCGTGCTCTAGAAGGAGATGTGTCTCTAGCAGACCTTAATGAAGGAATTAAGCCTGGCCATAGCTCTGTCTACAGTTCTCATGGAAGTTCAGATTATGACACAGTTCAATACAGGGAGGATATGAAAAAGTTCAGAAAAATGGCATTTGGAGGAGGAACGAATGAGTATGGTGCCAGTAGCGAATACAGCGGACCGCCAACGAGTGAGTACGGCTTGTACCCTTCGGGCTCAAGCAGTGAAGGCCAGAGTCGCCAGACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAGCCAAGGTTTCAGCGGAAGTTCATAA 2025 0.5121 MSATPSPGAAPAPTSPPAPATNNTSPPPSPSAPPPSTPASPPPATPSAPPPATPSAPPPAPATPSLSPPSTSPPSPPSPPSTSTPPESSASPPPPSSTNTPPSPPSRSSPTPPSSSTSPSTPNRSPPPPSSKSSPSPSSSSSSSNNISTGVVVAIAVGAVAVLLVLSILCICCRKKKRRRDEEYYVPPPVPPQGPKVDLYGGPQRQWQHNAPPPSDHVVSVMPKPSPPPPPVASRPAHLPVYAPQPPPPPPPFISSSGGSGSNYSGGETILPPPSPGFALGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSNHTFIEDSLVDWARPTLTRALEDENFDSVVDPRLQHEYDPNEMARMVACAAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDTVQYREDMKKFRKMAFGGGTNEYGASSEYSGPPTSEYGLYPSGSSSEGQSRQTTREMEMRKMKNSQGFSGSS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0684 674 Gene3D Transferase(Phosphotransferase) domain 1 375 582 - -
Lele46g0684 674 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Lele46g0684 674 Gene3D Phosphorylase Kinase; domain 1 279 374 - -
Lele46g0684 674 SMART serkin_6 299 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0684 674 MobiDBLite consensus disorder prediction 218 255 - -
Lele46g0684 674 MobiDBLite consensus disorder prediction 625 654 - -
Lele46g0684 674 FunFam Proline-rich receptor-like protein kinase PERK1 375 583 - -
Lele46g0684 674 MobiDBLite consensus disorder prediction 625 674 - -
Lele46g0684 674 SUPERFAMILY Protein kinase-like (PK-like) 279 572 IPR011009 -
Lele46g0684 674 MobiDBLite consensus disorder prediction 1 146 - -
Lele46g0684 674 ProSiteProfiles Protein kinase domain profile. 299 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0684 674 Pfam Protein tyrosine and serine/threonine kinase 304 572 IPR001245 GO:0004672|GO:0006468
Lele46g0684 674 MobiDBLite consensus disorder prediction 184 269 - -
Lele46g0684 674 CDD STKc_IRAK 305 574 - -
Lele46g0684 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Lele46g0684 674 MobiDBLite consensus disorder prediction 9 134 - -
Lele46g0684 674 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 158 639 - -
Lele46g0684 674 FunFam proline-rich receptor-like protein kinase PERK1 277 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0684 Lele-ChrLele46 5072607 5075975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0684 88 657 Trihelix Transcription Factor Family AT1G70460 48.342 4.17e-170 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele46g0684 PK_Tyr_Ser-Thr 1.5e-47 CL0016