Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0664 ATGCCTAGCCGATCAACCGGAACTATAACACAAGAATGGGAACCGGTGGTTCTGCACAAGAACAAACCCAAGGCTCAGGACCTGCGAAATCCGAAGGCTGTGAATCAGGCACTCCGAGCAGGAGGTGAGGTTCAGACGGTCAAGAAGTTCGACGCTGGTTCGAATAAGAAAACTGCTCCGATCGTGAACACGAGGAAGCTCGATGGAGAAACAGAGCCAGCTGCTCTGGAGAAGGTAAGAACAGAGGTGAGAACAGCTATACAGAAGGCAAGATTGGAGAAGAAGATGAGTCAGGCGGATCTTGCGAAGCAAATCAACGAGCGGCCACAGGTAGTGCAGGAGTACGAGAACGGGAAAGCTGTTCCGAATCAAGCCGTGCTGGCGAAGATGGAGAGAGTTCTGGGCGTTAAACTGAGAGGAAAGGTAGGCGGAAAGTTGCAATATTGTGATTATAATGTTAAAGAAGTTGAGGGCTGTAATTATTATGATATATTGATTGATGAAGATTTATATACAGAGAAAATGGCAAGCCTTTCTGATGTTCATCGTTCTCTTTCCTCTTTCAATATTCCAACCATCAAGTTCACCAAGCTCTTCATCAATGGACAATTTGTTGATTCCATTTCAGGAAAAACGTTTGAGACTGTAGACCCAAGAACAGAGGAAGTGATCACTGAAATAGCAGAGGCGACTGAAGAAGACGTTGATCTCGCCGTGAAGGCGGCACGCGACGCTTTCGATTCTGGTCCATGGCCACGCATGACCGGCTCTGAGAGAGCCAAGATAATGCTGAGATGGGCCGATCTAATTGAAGAGAACGTTGAGGAGATCGCTGCGTTGGACACCATTGATGGCGGGAAGCTATACGCGTCGTGTAAGGCGATCGATATTCCTCATGTAGCTAGTCTTCTTCGTTACTATGCGGGTGCTGCGGATAAGATTCATGGAGAGGTGTTGAAATCGTCAAGGAATCTTCACGCTTATACTTTGATGGAACCTATTGGTGTTGTTGGCCACATCATACCCTGGAATTTCCCTACCAATTTGTTCTTCGCCAAAGTTAGCCCTGCTTTGGCTGCTGGCTGCACCATGGTCCTTAAACCTGCTGAGCAAACTCCTCTCTCTGCTCTCTTCTATGCTCATCTTTCTAAGCTGGCTGGAATCCCAGACGGGGTGCTCAATGTGATACCTGGGTCTGGCCGGATTGCTGGTGCTGCAATAAGCTCTCATATGAACATTGATGCGGTGAGTTTTACTGGTTCAACAGAAACTGGTCGTCAAGTAATGCAGGCGGCAGCAATGAGTAATTTGAAACCAGTTTCACTGGAATTAGGAGGCAAGTCACCCCTCATAATTTTCAATGACGCTGATGTTGACAAGGCTGTTGAGCTTGCCCTCTTTGGCATCTTATGCAACAAGGGGGAGGTTTGTGTTGCAAGTTCCCGAGTTTTTGTTCAGGAAGAGATTTATGAGGAATTTGAGAAGAAAGTGGTGGAGAAAGCAAAAGCTTGGGTGGTAGGAGACCCTTTTGATCCGAAAGTTCAGCAAGGACCCCAGGTTGACAAGAAGCAGTTTGATAAAATTCTTTCATATATTGAGCACGGAAAGAGAGAAGGAGCCAACTTGTTGACTGGGGGTAAGCGAGTAGGCAACAAGGGATACTATATTGAACCTACAATTTTCATCAACGTCAAGGAGGACATGATGATAGCGCAGGATGAAATATTTGGGCCTGTGATGACACTCCTTCAGTTCAAGAGCATTGAAGAAGCAATAAAGAGTGCCAACAACACCAGATATGGGCTAGCAGCTGGGATTATGACGAAGAACTTGGACATAGCAAACACAGTTTCAAGGCACATTCGTGCAGGCATTGTTTGGATTAACTGTTATTTTGCCTTTGATAATGACTTCCCTTATGGAGGTTACAAAATGAGTGGATTTGGAAGAGATTATGGACTCCATGCCCTTCACAAGTATCTTCAAGTCAAATCTGTTGTAACTCCTATTTACAATTCTCCTTGGCTTTGA 2031 0.4574 MPSRSTGTITQEWEPVVLHKNKPKAQDLRNPKAVNQALRAGGEVQTVKKFDAGSNKKTAPIVNTRKLDGETEPAALEKVRTEVRTAIQKARLEKKMSQADLAKQINERPQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKVGGKLQYCDYNVKEVEGCNYYDILIDEDLYTEKMASLSDVHRSLSSFNIPTIKFTKLFINGQFVDSISGKTFETVDPRTEEVITEIAEATEEDVDLAVKAARDAFDSGPWPRMTGSERAKIMLRWADLIEENVEEIAALDTIDGGKLYASCKAIDIPHVASLLRYYAGAADKIHGEVLKSSRNLHAYTLMEPIGVVGHIIPWNFPTNLFFAKVSPALAAGCTMVLKPAEQTPLSALFYAHLSKLAGIPDGVLNVIPGSGRIAGAAISSHMNIDAVSFTGSTETGRQVMQAAAMSNLKPVSLELGGKSPLIIFNDADVDKAVELALFGILCNKGEVCVASSRVFVQEEIYEEFEKKVVEKAKAWVVGDPFDPKVQQGPQVDKKQFDKILSYIEHGKREGANLLTGGKRVGNKGYYIEPTIFINVKEDMMIAQDEIFGPVMTLLQFKSIEEAIKSANNTRYGLAAGIMTKNLDIANTVSRHIRAGIVWINCYFAFDNDFPYGGYKMSGFGRDYGLHALHKYLQVKSVVTPIYNSPWL 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0664 676 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 446 635 IPR016163 GO:0016620
Lele46g0664 676 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 442 449 IPR029510 GO:0016491
Lele46g0664 676 SMART mbf_short4 86 141 IPR001387 -
Lele46g0664 676 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 176 666 - -
Lele46g0664 676 SUPERFAMILY lambda repressor-like DNA-binding domains 82 138 IPR010982 GO:0003677
Lele46g0664 676 FunFam Multiprotein bridging factor 1 71 144 - -
Lele46g0664 676 Coils Coil 87 107 - -
Lele46g0664 676 Pfam Helix-turn-helix 87 138 IPR001387 -
Lele46g0664 676 SUPERFAMILY ALDH-like 188 672 IPR016161 GO:0016491
Lele46g0664 676 FunFam Aldehyde dehydrogenase, putative 638 664 - -
Lele46g0664 676 FunFam Aldehyde dehydrogenase3 446 635 - -
Lele46g0664 676 Gene3D - 72 152 IPR010982 GO:0003677
Lele46g0664 676 Pfam Multiprotein bridging factor 1 11 79 IPR013729 -
Lele46g0664 676 CDD HTH_XRE 86 138 IPR001387 -
Lele46g0664 676 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Lele46g0664 676 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 470 481 IPR016160 GO:0016491
Lele46g0664 676 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 200 463 - -
Lele46g0664 676 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 200 664 IPR016162 GO:0016491
Lele46g0664 676 Pfam Aldehyde dehydrogenase family 205 666 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0664 Lele-ChrLele46 4848893 4858269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0664 186 676 Aldehyde Dehydrogenase Gene Family AT3G24503 69.715 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lele46g0664 Aldedh 1.2e-177 CL0099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0664 46 4848893 4858269 Lele48g0816 48 13473966 13477486 hybridization