Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0656 ATGAAGAAGAAGGTCTATTTCCCTCTTCTCATTTCCTTCTTCTTAGGCGCAGTCTCCCTCTCTGCCGTGGCCGATGTCCCCATTACCAGCCATGGAGCTCTCACTGACGCCGAGGCCTTGTACATCAGGCAACGTCAGCTTCTTTACTACAGAGACGAGTTCGGCGACAGAGGAGAACAAGTCACCGTCGATCCTTCTCTGGTTTTCGAGAACAATCGCATTAGAAATGCTTATGTAGCTTTACAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGAACAATTGCACGCTCAATTGGGTTGGAGCCAATGTCTGTAACTATAGTAATGTTTTCTGTGCTCAGGCGCTTGACAACCCTAAGATTCGTACTGTCGCCGGCATTGATCTCAACCACTGTGACATTGCTGGGTACTTGCCGGAGGAGCTTGGACTACTCTCGGATCTTGCTCTCCTCCACATCAACACTAACAGGTTTTGTGGTTCTGTTCCTCACAAGTTTGATAGACTGAAAGTTCTGTTTGAACTGGATCTCAGTAACAATAGGTTCGCCGGGAAGTTCCCCACGGTGGTTCTGAGGCTTCCAACTCTCAAGTTCTTGGATCTGAGATTCAATGAATTTGAGGGGACTGTGCCTAGAGAGCTTTTTGACAAGGATCTAGACGCGATCTTCATAAACAACAATCGTTTCGTGTTCGATCTTCCCGACAATTTTGGTAACTCTCCGGTGTCGGTCATCGTCGTCGCCAACAACAAGTTCCATGGCTGTCTCCCGGCGAGCTTGGGCAACATGACGAACCTGAACGAGATCATTCTGTTGAATAATGCTCTCCGTTCGTGCTTGCCTTCAGAGATTGGGTTGCTGAAGAACTTGACAGTGTTCGATGTGAGCTTCAATCAGCTCTTGGGTCCCTTGCCAGACACCATTGGAGGCATGGTGAGCCTTGAGCAATTGAATGTAGCTCACAATTTGCTTTCTGGGAAGATTCCAGGGAGCATTTGTATGCTGCCAAACCTACAGAACTTCACATATTCATATAACTTCTTCACTGGCGAGCCACCGTCGTGCCTCAGCTTGCCGTCGTTCGATGATCGGAGAAACTGCTTGCCGGCAAGGCCACTACAGAGATCGGCGAAACAATGCAAGGCTTTCTTGTCACGGCCTGTGGACTGTAACTCGTTTAAATGTAAGCCATTTGTTCCGTCGCTTCCGCCACCTCCTAACCCTTCCCCTCCGATTCCTGTGCCTTCCCCACCACCCGTTGTCGTACCTTCACCTCCTCCATCCCCGGTTTACGTTCCACACTCTCCGCCTCCACCTTCTCCGCCACCACCTTCGCCGCCACCTCCGGCGTATTCGCCCCCACCACCTCCTCCATCGCCACCTCCGCCGGTTTATTCACCACCACCTCCTCCACCAGTCTACTCTCCACCTCCTCCTCCACCTTCTCCACCCCCACCGTCACCTCCTCCGCCAGTCTACTCTCCACCCCCACCCCCACCGTCACCTCCCCCTCCTTCACCACCCCCACCTTCACCTCCCCCGCCAGTCTATTCACCACCACCTCCACCCCCGTCACCTCCACCTCCTTCTCCATCGCCACCTCCACCCTCACCTCCCCCTCCATCTCCTCCACCATCATCACCCCCTCCAACGCCACAATATTGCGTCCGCTCTCCACCGCCGCCTCCACCAAATTCGCCGCCGCCGGCTCCTGTATTTTACCCACCACCGACTTACAGCTCGCCTCCACCGCCTCATCACTCCCCTCCACCGCCTCCTCACTCTCCTCCACCTCCTCCTCACTCACCTCCGCCGCCTATTTATCCCTATTTATCACCGCCACCTCCTCCCCCTGTCCATTCACCACCCCCACCATCTCCCCCCCCTTGTATAGAACCACCCCCACCCCCACCACCTTGTGAAGAGCATCCACCACCGTCACCTTCTCCCACACCTTATTTACCACCTCCATCCCCATCTCCCCCTCCACCACCATCTCCTGTTCAGTACAGTTCCCCGCCACCTCCACCACCAGCAGTTCATTACAGTTCTCCCCCACCACCAGTATACCATTCTCCTCCACCACCATCACCACCTCCCTGTGAAGAAACTCCGCCTTCTGCATCCCCACCTCCACCGGTCACATACGGAAACCCACCTACTCCTGTATATGAAGGGCCTCTGCCACCTGTCTTTGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2238 0.5429 MKKKVYFPLLISFFLGAVSLSAVADVPITSHGALTDAEALYIRQRQLLYYRDEFGDRGEQVTVDPSLVFENNRIRNAYVALQAWKQAILSDPNNCTLNWVGANVCNYSNVFCAQALDNPKIRTVAGIDLNHCDIAGYLPEELGLLSDLALLHINTNRFCGSVPHKFDRLKVLFELDLSNNRFAGKFPTVVLRLPTLKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGSICMLPNLQNFTYSYNFFTGEPPSCLSLPSFDDRRNCLPARPLQRSAKQCKAFLSRPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSPPPSPVYVPHSPPPPSPPPPSPPPPAYSPPPPPPSPPPPVYSPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPSPPPPSPPPPSPPPSSPPPTPQYCVRSPPPPPPNSPPPAPVFYPPPTYSSPPPPHHSPPPPPHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPSPPPCIEPPPPPPPCEEHPPPSPSPTPYLPPPSPSPPPPPSPVQYSSPPPPPPAVHYSSPPPPVYHSPPPPSPPPCEETPPSASPPPPVTYGNPPTPVYEGPLPPVFGVSYASPPPPPFY 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0656 745 FunFam Leucine-rich repeat extensin-like protein 5 240 379 - -
Lele46g0656 745 PRINTS Proline rich extensin signature 399 420 - -
Lele46g0656 745 PRINTS Proline rich extensin signature 423 439 - -
Lele46g0656 745 PRINTS Proline rich extensin signature 445 462 - -
Lele46g0656 745 Gene3D Ribonuclease Inhibitor 240 382 IPR032675 -
Lele46g0656 745 MobiDBLite consensus disorder prediction 428 745 - -
Lele46g0656 745 Gene3D Ribonuclease Inhibitor 78 239 IPR032675 -
Lele46g0656 745 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 520 - -
Lele46g0656 745 FunFam Leucine-rich repeat extensin-like protein 1 78 239 - -
Lele46g0656 745 SUPERFAMILY L domain-like 78 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0656 Lele-ChrLele46 4755110 4757347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0656 26 458 Leucine-rich Repeat extension Gene Families AT3G24480 68.203 0.0 618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0656 46 4755110 4757347 Lele47g0776 47 14080020 14082245 hybridization
Lele46g0656 46 4755110 4757347 Lele48g0825 48 13580438 13582639 hybridization