Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0634 ATGGCGATGGGAGACAGCATTGCCATTCTCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCCTCATCATTTTTGTCTGCAAACCATGGCGTTTCTTTTTCTTTTCGCGACCCCGTTTATCCATCAAGGATGATGACATAGAGAGGCCCCTAGTTGTAGATGATGCAAGCGCTTTATGTAATCAGAGCAATGAATTGCCCCGAGACTATGATCTTGAGGGCACATGCTTTTCCAATGAGGGTCCTTTTCGCTCACCACGATCACATGGACTTGTTCATAAGCAAAGGCTTCCCGCTTCTTCTCCTAATGTGCCACAAGGTGATAGTTTGGTTTTAGATTTAACTTCTGATGCTCCAGAAGAAGTTGCCTTTGGTCAAACACTTAAGCTTCCCCCAGCCCAGTTAGCTGAAATTCAAAAGCATGCTAGAGTGAATGTTGAAGAGGATAGATTGGAGGACACTGTGCAAAGAGATATCTTAGATCAAAGAAGTTGTCTCACTCTGGAGGTTATCAGTGGTCCTTCTTGTGGAGTCCGTTGTTCTGTACAATCAACAAATCCTTCCCATCTACCTCTGACAATTGGAAGAGTTTCTCCAAGTGATTTATTAATAAAGGATTCAGAAGTGTCAGGAAAGCATGCTCTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGATAGATATGGGTAGCCTGAATGGAACACTTTTGAATTCTTGGTCAATCAACCATCCAGACCCTAGCAACAGGCTTTGGGGTGAGCCATTTGAGCTTGCCAATGGAGATATTATAACTCTTGGAACAACATCAAAAGTCGTTGTCCATCTTTCTTCTCCAAGTAGGCATCAAATTCCATTTGGAGTAGGTATGGTTTCAGATCCCATGGCTTTACGTCAAGGAGGAAAAAAGCTACCTATGGAAGACGTTTGCTATTATCAATGGCCTCTTCCTGGGCTGGATCAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGATGGGGCTGCTAAATCTGCTAGCAAGCTTTTTCCCGAAGTAGTTGCTAGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCACTACATGATGCATCTGATGTTCTTAGAGAGGCATTTTCTCGAACAGAAGTAAGCATGAATCACCATTATGAGGGATGTACAGCAACATTGCTTCTGGTGTGGGTTGATGGTGATGAAAATTTCTATGCACAATGTGCAAATGTTGGGGACTCTTCCTGTGTTATGAGTGTCTATGGGAAACAGATCAACATGACAAAAGATCATAAGATAGCAAATACTTCTGAAAGACTCCGAATTGAAGAGAGGGGTGAGCCCTTGAAAGATGGGGAAATGCGTCTATACGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAAGAAAAAGATTCCCGGTTTAGTTCAGAGCCTTATATAAGTCAAGCAGTCCACATTGATCAAACAAGCCGGGCTTTTGCCATTCTAGCTAGTGATGGTTTGTGGGATGTCATCAGCATGAAGAAGGCTATTCAGCTGGTGCTTCAGGCGAGAGACAGATACTCCTCAGTTGCAGAGAATTCTGCAGAAAAGGTTGCTAATTTCTTGGTGGGTGAGGCTAGAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATAACTTTGCCAGATCCTCTTGTAAATCTGAGTCCTAG 1719 0.42 MAMGDSIAILFLLLMLLLIIVLIIFVCKPWRFFFFSRPRLSIKDDDIERPLVVDDASALCNQSNELPRDYDLEGTCFSNEGPFRSPRSHGLVHKQRLPASSPNVPQGDSLVLDLTSDAPEEVAFGQTLKLPPAQLAEIQKHARVNVEEDRLEDTVQRDILDQRSCLTLEVISGPSCGVRCSVQSTNPSHLPLTIGRVSPSDLLIKDSEVSGKHALINWNLDKLKWELIDMGSLNGTLLNSWSINHPDPSNRLWGEPFELANGDIITLGTTSKVVVHLSSPSRHQIPFGVGMVSDPMALRQGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEVVASILSDSLKRERVLSLHDASDVLREAFSRTEVSMNHHYEGCTATLLLVWVDGDENFYAQCANVGDSSCVMSVYGKQINMTKDHKIANTSERLRIEERGEPLKDGEMRLYGINLARMLGDKFLKEKDSRFSSEPYISQAVHIDQTSRAFAILASDGLWDVISMKKAIQLVLQARDRYSSVAENSAEKVANFLVGEARTLRTKDNTSVIFLDFDNFARSSCKSES 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0634 572 FunFam Protein phosphatase 2C 70 296 567 - -
Lele46g0634 572 ProSiteProfiles PPM-type phosphatase domain profile. 288 560 IPR001932 -
Lele46g0634 572 SUPERFAMILY SMAD/FHA domain 164 276 IPR008984 GO:0005515
Lele46g0634 572 ProSiteProfiles Forkhead-associated (FHA) domain profile. 192 243 IPR000253 GO:0005515
Lele46g0634 572 PANTHER PROTEIN PHOSPHATASE 2C 284 557 IPR015655 GO:0004722|GO:0006470
Lele46g0634 572 SMART FHA_2 191 243 IPR000253 GO:0005515
Lele46g0634 572 SMART PP2C_4 283 558 IPR001932 -
Lele46g0634 572 FunFam Protein phosphatase 2C 70 161 295 - -
Lele46g0634 572 Pfam FHA domain 193 268 IPR000253 GO:0005515
Lele46g0634 572 SUPERFAMILY PP2C-like 299 562 IPR036457 -
Lele46g0634 572 CDD PP2Cc 300 560 IPR001932 -
Lele46g0634 572 Pfam Protein phosphatase 2C 300 553 IPR001932 -
Lele46g0634 572 Gene3D - 161 294 - -
Lele46g0634 572 CDD FHA 166 274 IPR000253 GO:0005515
Lele46g0634 572 ProSitePatterns PPM-type phosphatase domain signature. 325 333 IPR000222 GO:0043169
Lele46g0634 572 Gene3D - 295 567 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0634 Lele-ChrLele46 4552606 4566172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0634 1 561 PP2C-type Phosphatase Gene Family AT5G19280 57.046 0.0 650