Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0626 ATGGATCAAAACCACCAAGGGGCATATGGAATGCATCAGTATCAATCTAACCCAATGATGGCTGCTCCTCAGACTCAGTCTCTGTCTCCTTCTCAGGCAGCACCAGGTCTTCCTGCATCATCATCTTCATTCCTGAGAGAGCAACAATATGCTCACCAGTACATGAATCAACTTCAGCAACAAGAGCTGCAGCAACAACTCCAGAACTTTTGGGCAAATCAGTATCATAAGAGTGAGCAGATTGTTGATTTCAAGAATCATAGCCTTCCTTTAGCTCGGATCAAGATGATCATGAAGGCTGATGAAGCTGTGAGGATGATATCAGCTGAAGCTCCAGTTATATTTGCCAGGGCCTGTGAGATGTTCATCCTGGATCTAACTCTCAGATCTTGGATCAACGCAGAGGAGAACAAGGGGAGGACACTTCAGAAGAATGACATTGCTGCAGCAATCACAAAGACAGATGGGTTTAATTTTCTTGTTGATATTGTGCCAAGAGATGACTTGAAGGATGAAATCCTCTCTGCATCAGTTCTTAGAGTCCCACCAGCAGCAGCAGAGAATGTTCCTTACTACTACATGCCACCTCAGCAAGTTGTGGGCCCTCCTCCTCATTCTCCATATGCAGCTCCAAAAGTGATCATGGGACAGTCAGTTTCAGTGAGAGCTGGGACATTGCAAGCTCGTGTGGTGGTGTTGCTGGTGGGAAAGTGA 714 0.4594 MDQNHQGAYGMHQYQSNPMMAAPQTQSLSPSQAAPGLPASSSSFLREQQYAHQYMNQLQQQELQQQLQNFWANQYHKSEQIVDFKNHSLPLARIKMIMKADEAVRMISAEAPVIFARACEMFILDLTLRSWINAEENKGRTLQKNDIAAAITKTDGFNFLVDIVPRDDLKDEILSASVLRVPPAAAENVPYYYMPPQQVVGPPPHSPYAAPKVIMGQSVSVRAGTLQARVVVLLVGK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0626 237 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 43 177 - -
Lele46g0626 237 Gene3D Histone, subunit A 50 166 IPR009072 GO:0046982
Lele46g0626 237 MobiDBLite consensus disorder prediction 19 40 - -
Lele46g0626 237 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 88 151 IPR003958 -
Lele46g0626 237 SUPERFAMILY Histone-fold 53 160 IPR009072 GO:0046982
Lele46g0626 237 FunFam Nuclear transcription factor Y subunit gamma 53 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0626 Lele-ChrLele46 4478986 4480058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0626 1 216 CCAAT-HAP5 Transcription Factor Family AT1G08970 54.587 4.43e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele46g0626 CBFD_NFYB_HMF 4.6e-14 CL0012