Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0623 ATGGCTTTTCTCCAGTTATATCCAATCTTCTTGTTCTTCTTGCTTTACATACTTTCTGCTACTGCTCAGACTTCCATAAATATCTCCCTTGGCTCTTCCCTCACTGCTGAGGAAGATGGCTCCTTCTGGGCTTCACCATTTGATGAATTTTCATTTGGGTTCCAACAAATTGAAGAAGATGGATTCTTACTAGCCATCTGGTTCAACAAAATACCAGAAGTAACTGTTGTTTGGTCAGCCAATGGACAAAATCTTGCACCAAAGGGTTCTAAAGTTGAGCTCACTTCAAATGGTTGGTTCCATCTGCTTGATCCCAACGGTAAGCAAATCTGGAATGCTAACCCTTTAGGAAACAATGAAGTTGCTTATGCAATCATGCATGATTCTGGTAACTTTCAATTAGTTGGTTATGACTCTCAAACTTTGTGGCAGAGCTTTGATAAACCCACTGACACAATTTTACCAGAACAAGTTTTAAATCAACCTGCTAAACTAGTTTCATGCTATTTGCCAAATAATTATTCAAAGGGTAGATTTCAGTTTAAACTACAGAATGATGGAAATCTTGTTCTTTACACAACCCATTTTCCACTAGATGATGTGAATTCTGCTTATTGGAGTACTCAAGTTCTTGGCTTTGGCTTCTCTTTGGTCTTCAACCAATCGGGCAACATATTTGTTCAAAGAAGTAATGGAAGTATAATCAAAGAAATATCATCACCAAATGCTACTCAATCTACACGAGATTTCTATCAGAGAGCTGTTCTTGATTATGATGGAGTCTTCAGGCACTATATCTACCTCAAGAATAGTAGCTCTAGCACTGGAACCTGGTCAACTTTGTCTGTAACACCTGAAAATATTTGTTTGCGTGTTAATGGAGATTCAGGAAGTGGAGCTTGTGGTTTGAACAGCTATTGCAGATTTGAAGGGACAACCAAAAGCTGCCATTGTCCATATGGTTACAGTTTCATTGATCCAAGGGATGTGATGAAAGGTTGCAAACAGGACTTTGTTTCACAAAGTTGTAATCAGAATTCTTTAGAAACTGATCTGTTTGATTTCAATGAGATGCCCAACACGGATTGGCCAGTTTCTGACTATGAACACTTTCGATCGGTGTCTGAGGATTGGTGCAGAAAAGCTTGCTTGGAAGATTGCTTTTGTGCCCTTATTATCTTCAAACATAGGGAATGTTGGAATAAGAAGCTACCTCTCTCTAATGGAAGAATGGATCGTTCTATTGCAGGCAAAGCTTTGATCAAAATAAGAATGGATGATAGTCCTGAGAATAATGATCAATCCACATTGTTTATAATAGGTTCCACACTTTTAAGCAGTTCCGTTTTCTTGAACTTTTTGTTGTTAATAGCAGCTTGTTTGGTTGCATATCGATTTAGCCAGAGAAATTCCGAAGTTCATAAAGATGTCAAATTCATATCAAGTATGAATCTCAGAAGTTTCACTTATAAAGAGTTAAAGGAAGCAACAAAAGGGTTCACAGAAGAACTTGGTCGTGGTGCATTTTCTACTGTTTATAAAGGTTTTCTAACAGACATACTAGGGAACTTCATTGCTGTGAAAAGATTGAATATGGTGAATGGAAGTGAGAAGGAATTCGAAGTAGAAGTAAGCGCAATTGGTCGAACGCATCATAGGCATCTGGTGCAACTGTTGGGATTCTGCAATGAAGGAGAAAATAGGTTACTTGTGTATGAATTCATGAGTAAGGGAACTTTAGCAAGTTTCATTTTCAAAGATCAAAGGCCAACTTGGAATCTAAGAGTAGAAATTGCAATTGGAATAGCCAAAGGACTCTTGTATTTACATGAAGAGTGTAACACTCAGATCATACACTGTGATATTAAGCCTCAAAATGTCTTGCTTGATGATTCTTACATAGCTAAAATTTCAGATTTCGGTATAGCGAAGCTGTTGAAGATTGATCAGACTACAACTACAACAGCAATAAGAGGAACTAAAGGGTATGTTGCAGCTGAGTGGTTTAGAAACAAGCCAATTACCATGAAAGTGGATGTTTACAGTTTTGGAGTTTTGTTATTGGAGCTCATCTGTTGCAGAAAGAACTTTGACGTGAATATTGAAGATGAGAATAAGATGGTATTAATAGATTGGGTGTATGATTGCTTTCATTACAGGAGATTAGATTTGTTAGTGGAAGATGATAGAGAAGCTCAAATTAACATGAAGAGAGTAGAAGATTATGTGAAGATTGGCATATGGTGTATTCAAGAGGATCCATCAGCAAGACCCACCATGAAGAAAGTTGTTCAAATGCTTGAAGGATTCATGGACGTGTCAAATCCTCCAGAGCTACCATCCTTTACAAGTTAG 2355 0.3758 MAFLQLYPIFLFFLLYILSATAQTSINISLGSSLTAEEDGSFWASPFDEFSFGFQQIEEDGFLLAIWFNKIPEVTVVWSANGQNLAPKGSKVELTSNGWFHLLDPNGKQIWNANPLGNNEVAYAIMHDSGNFQLVGYDSQTLWQSFDKPTDTILPEQVLNQPAKLVSCYLPNNYSKGRFQFKLQNDGNLVLYTTHFPLDDVNSAYWSTQVLGFGFSLVFNQSGNIFVQRSNGSIIKEISSPNATQSTRDFYQRAVLDYDGVFRHYIYLKNSSSSTGTWSTLSVTPENICLRVNGDSGSGACGLNSYCRFEGTTKSCHCPYGYSFIDPRDVMKGCKQDFVSQSCNQNSLETDLFDFNEMPNTDWPVSDYEHFRSVSEDWCRKACLEDCFCALIIFKHRECWNKKLPLSNGRMDRSIAGKALIKIRMDDSPENNDQSTLFIIGSTLLSSSVFLNFLLLIAACLVAYRFSQRNSEVHKDVKFISSMNLRSFTYKELKEATKGFTEELGRGAFSTVYKGFLTDILGNFIAVKRLNMVNGSEKEFEVEVSAIGRTHHRHLVQLLGFCNEGENRLLVYEFMSKGTLASFIFKDQRPTWNLRVEIAIGIAKGLLYLHEECNTQIIHCDIKPQNVLLDDSYIAKISDFGIAKLLKIDQTTTTTAIRGTKGYVAAEWFRNKPITMKVDVYSFGVLLLELICCRKNFDVNIEDENKMVLIDWVYDCFHYRRLDLLVEDDREAQINMKRVEDYVKIGIWCIQEDPSARPTMKKVVQMLEGFMDVSNPPELPSFTS 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0623 784 Pfam D-mannose binding lectin 75 159 IPR001480 -
Lele46g0623 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 22 147 - -
Lele46g0623 784 SUPERFAMILY Protein kinase-like (PK-like) 477 768 IPR011009 -
Lele46g0623 784 Gene3D - 23 148 IPR036426 -
Lele46g0623 784 CDD B_lectin 50 149 IPR001480 -
Lele46g0623 784 PIRSF SRK 1 784 IPR024171 GO:0004674
Lele46g0623 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 279 IPR036426 -
Lele46g0623 784 ProSitePatterns Protein kinases ATP-binding region signature. 504 528 IPR017441 GO:0005524
Lele46g0623 784 Gene3D Transferase(Phosphotransferase) domain 1 575 778 - -
Lele46g0623 784 FunFam S-receptor-like serine/threonine-protein kinase 467 574 - -
Lele46g0623 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Lele46g0623 784 SMART blect_4 33 149 IPR001480 -
Lele46g0623 784 FunFam Serine/threonine-protein kinase 150 292 - -
Lele46g0623 784 Gene3D Phosphorylase Kinase; domain 1 461 574 - -
Lele46g0623 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 775 - -
Lele46g0623 784 Gene3D - 150 283 IPR036426 -
Lele46g0623 784 ProSiteProfiles Bulb-type lectin domain profile. 19 147 IPR001480 -
Lele46g0623 784 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0623 784 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0623 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 192 IPR036426 -
Lele46g0623 784 Pfam Protein kinase domain 502 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0623 784 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0623 Lele-ChrLele46 4444845 4447199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0623 468 769 Receptor kinase-like Gene Family AT1G60800 40.317 1.04e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele46g0623 Pkinase 2.2e-46 CL0016