Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0620 ATGTCTCACATAGCTGTCGAGAGGAACAGGAGAAGACAGATGAACGAGCATCTCAAAGTTTTAAGGTCTTTGACCCCTTGTTTCTATATCAAAAGGGGAGACCAAGCATCAATAATAGGGGGAGTGATAGAGTTCATAAAGGAGTTACACCAAGTTCTGGAAGTTCTGGAATCGAAGAAAAGAAGAAGAAAGAGTGTAAGCCCTAGCCCAAGAACACCACTGCTGCCGCCGTCGCCGCCACCAGCAAGCAGCTTGAAGGAGGAAGTTGGAGCAGCAAGCTGTAATTCTTCAGTTGCAGATGTGCAAGTGAAAATCTCAGGCTCAAACGTGATTCTTAGAGTGATTTGCCACAGAGTTGCAGGTCAAGTTTCAAAGATAATCAGTGTTCTTGAGAGGCTCTCTTTTGAAGTCCTTCATCTCAATATCAGTAGCATGGAGGATACAGTTCTATACAACTTTGTTGTCAAGATAGGGTTGGAGTGCCAGTTGAGTCTGGAGGAACTAGCAGTGGGAGTACAGCAAACTTTCTGCGGTCAGAAGCTGTTAACTACCACAATAGCCTCTGAATACTCTATCCCTAAAGCTAATAGACATTCCTCGACTCCAATTTTCACAGCGCAAGCTAAGTGTGCCACTCATGTTTTTGTCGAGCTTGTTAAGAATGGTGAGTTCATTCCCCTCGGAGCATGCTTTACAATCTCGTCTCGTCTCATCTCGCCTTGCATTCCATGTTTTTATATCAGTGATGGAGAGCATGTACGTTGTGATTCGTGCAGAGTTCATAAAGTGTTGGAGCACAAAAATGGCAAAGCTAGGAGCAAGGAGCCTAGGCACTGTATGGAACAAGAAGCTGATGGTGGAGGTATGGTTTGA 873 0.4467 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLEVLESKKRRRKSVSPSPRTPLLPPSPPPASSLKEEVGAASCNSSVADVQVKISGSNVILRVICHRVAGQVSKIISVLERLSFEVLHLNISSMEDTVLYNFVVKIGLECQLSLEELAVGVQQTFCGQKLLTTTIASEYSIPKANRHSSTPIFTAQAKCATHVFVELVKNGEFIPLGACFTISSRLISPCIPCFYISDGEHVRCDSCRVHKVLEHKNGKARSKEPRHCMEQEADGGGMV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0620 290 MobiDBLite consensus disorder prediction 60 86 - -
Lele46g0620 290 Gene3D - 1 65 IPR036638 GO:0046983
Lele46g0620 290 PANTHER TRANSCRIPTION FACTOR FAMA 1 176 IPR044283 GO:0003700|GO:0010052
Lele46g0620 290 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Lele46g0620 290 SMART finulus 4 55 IPR011598 GO:0046983
Lele46g0620 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Lele46g0620 290 CDD bHLH_AtFAMA_like 1 64 - -
Lele46g0620 290 FunFam Transcription factor MUTE 1 67 - -
Lele46g0620 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 74 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0620 Lele-ChrLele46 4421995 4425529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0620 1 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 62.871 3.55e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele46g0620 HLH 9e-08 No_clan