Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0613 ATGAATATCATTTCGGTACCCGTGTGCAAGGTTCAAGCTTCAGTGAATTTAGAAAGGGGACTGAGTACGGACCCTTTCTTCCTCCGCCACCACCTTAATAAGGACAAGGTGGTTGTCATCATGGGAGCCACCGGCTCCGGCAAGTCAAAGCTTGCCATTGACCTGGCCACCCACTTTGCTCCCTCGGAAATCATCAACTCCGACAAAATGCAAGTTTTTCAAGGCCTCGAGATCACCACCAATAAGGTGACAGAACAGGAGTGTATGGGTGTTCCTCATCATTTACTTGGCATAGCAGATCCCAACCTTGACTTCACCGCCGGCGACTTCATCCACCATGCCTCCTCCGCTGTTGATTCCATCGTCGACAGACATTGCCTTCCCATCGTCGCCGGCGGCTCCAATTCCTACATAGAAGCCTTTGTGAACCACCACTCTGGGTTACAAAATCCCCGGCTTGAGTTTTGCTTCCTCTGGGTCGACGTCTCGCTCTCGGTTCTCCACTCCTTCTTATCGGACCGGGTCGACCGGATGGTGGAAGCCGGTTTAGTTGAGGAGGTTCGACAAATGTTTAACCCTTGGGCTGATTATACAAAAGGGATAAGAAAAGCTATCGGAGTTCCAGAGTTGGACCAGTTTCTGAGAACTGAGTCGAAGGCCGATGAGAGGAGGAAGAAGAAGCTTCTAGAAGTCGCCATTACTAGGATGAAGATCAACAACTGCCGGCTTGCGAGCCGCCAACTGCAGAAAATTCATCGGCTTCACGGCTTGTGGAAGCGGAATATGCATCGGCTCGATGCGACGGAGGTGTTCATGATGAGGAATAATTGTGAGGAATCATCGAAGGAGGCGTGGGAGAATCAAGTGTTGAAGAAGAGCAGAAGGATCGTTCACAAGTTCTTGTACGAGGAAAGCAATGTTCCGGCGGTCTCTTCTAAAACTCTTATGAATGTAACACCGTCGATACCGCCGCCGGCTTCTCTGGTGGCCATGGCTACTGCAACTCATTAG 1011 0.5054 MNIISVPVCKVQASVNLERGLSTDPFFLRHHLNKDKVVVIMGATGSGKSKLAIDLATHFAPSEIINSDKMQVFQGLEITTNKVTEQECMGVPHHLLGIADPNLDFTAGDFIHHASSAVDSIVDRHCLPIVAGGSNSYIEAFVNHHSGLQNPRLEFCFLWVDVSLSVLHSFLSDRVDRMVEAGLVEEVRQMFNPWADYTKGIRKAIGVPELDQFLRTESKADERRKKKLLEVAITRMKINNCRLASRQLQKIHRLHGLWKRNMHRLDATEVFMMRNNCEESSKEAWENQVLKKSRRIVHKFLYEESNVPAVSSKTLMNVTPSIPPPASLVAMATATH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0613 336 ProSitePatterns Tyrosinase and hemocyanins CuB-binding region signature. 24 35 IPR002227 GO:0016491
Lele46g0613 336 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 262 - -
Lele46g0613 336 Gene3D - 34 301 IPR027417 -
Lele46g0613 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 195 IPR027417 -
Lele46g0613 336 Pfam IPP transferase 151 249 - -
Lele46g0613 336 Pfam IPP transferase 71 144 - -
Lele46g0613 336 FunFam Adenylate isopentenyltransferase 5, chloroplastic 164 262 - -
Lele46g0613 336 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 301 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0613 Lele-ChrLele46 4338190 4339200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0613 152 305 C2H2 Transcription Factor Family AT2G27760 33.149 9.19e-23 96.7