Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0608 ATGTCAGGCCCAGAGTGTTGCTCAAACCCTCCAACCCTCAACCCAAGTGCTGGAGCTGGTCGCGTTGAGAAAGTTGCTGGCATAGATACTTATGTCGCTGGCTTCGCCGACTCCAAGCTTGCTGTTCTTCTGATCGCCGATGTTTTTGGGTATTATGTAGTTGTTCCTGATTTCTTCCATGGGGATCCTTTTGTTCCTGAGAAAGCTGACAGGCCAATATCTACTTGGATAAAAGATCATGCACCGGTTCCTAGTTTCGTGAAAATATTTCCTCAAGTTGCACATGGTTGGACTGTGAGGTATAACACTGAAGATGTTAAAGCTGTTTCAGAAGCCGACGAAGCGCATCAGGACATGTTGACCTGGTTTGCCAAGTACCTAAAATTCAACCTGCAAGTGGATGTCTGCTTCTCTGTCTTAGCAAATGACACTGATAGAGGAAGGATGACTAATACGGTTTCAGATGAGGTAGGTGATGAGCTGAAATGGATTTTCTACTCTCGTCTTGCAACTCAGGATGCTGTGAAATGTATTGGTGCTTGGTTTTACGGTTTCTCGATTCCGAAGAGTCGACAGCACTCCCTCCGTTTCACTGGGGATTTTCTGTTCCGAGTTGGTAAGATCCGGCTTTTACAGTTTCGAACTCTCTGGTTTGCTTTGAGGAAAATGTATGAAATTGCAATTCATGATCTTGTTAATCCGCTCTCGTGGTGTTACTTGTGTGGTTCGGAGAGTGGGTGTTTGCTGGTTGTTTGTATTGTTGTCATTGCCTCTCGATGTTATATTGCATTGACAATGGTGAGAGTTAGTGTCTTAAATGATGCTCTGAAGAGTATGTACAATGCTGAGAAAAGGGGGAAACGTCAGGTCATGATTAGGCCATCCTCAAAAGTGATCATTAAATTTCTTTTGGTGATGCAGAAGCATGGTTACATTGGAGAGTTTGAGTATGTTGATGATCACAGGGCTGGCAAAATTGTTGTGGAATTAAATGGAAGGTTGAATAAATGTGGTGTTATTAGTCCCCGTTTTGATGTGGGTGTCAAGGATATAGAACCTTGGACTGCAAGGCTACTTCCCTCGAGACAGTTTGGCTATATTGTCTTGACCACCTCTGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGTAAAGTGTTGGGTTTCTTTTACTAG 1188 0.4352 MSGPECCSNPPTLNPSAGAGRVEKVAGIDTYVAGFADSKLAVLLIADVFGYYVVVPDFFHGDPFVPEKADRPISTWIKDHAPVPSFVKIFPQVAHGWTVRYNTEDVKAVSEADEAHQDMLTWFAKYLKFNLQVDVCFSVLANDTDRGRMTNTVSDEVGDELKWIFYSRLATQDAVKCIGAWFYGFSIPKSRQHSLRFTGDFLFRVGKIRLLQFRTLWFALRKMYEIAIHDLVNPLSWCYLCGSESGCLLVVCIVVIASRCYIALTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKDIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0608 395 ProSitePatterns Ribosomal protein S8 signature. 365 382 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele46g0608 395 SUPERFAMILY Ribosomal protein S8 269 395 IPR035987 GO:0003735|GO:0005840|GO:0006412
Lele46g0608 395 FunFam 40S ribosomal protein S15a 335 395 - -
Lele46g0608 395 Gene3D - 335 395 - -
Lele46g0608 395 Pfam Ribosomal protein S8 272 395 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele46g0608 395 Hamap 30S ribosomal protein S8 [rpsH]. 267 395 IPR000630 GO:0003735|GO:0005840|GO:0006412
Lele46g0608 395 Gene3D - 266 334 - -
Lele46g0608 395 FunFam 40S ribosomal protein S15a 266 334 - -
Lele46g0608 395 PANTHER 40S RIBOSOMAL PROTEIN S15A 266 394 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0608 Lele-ChrLele46 4264516 4279623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0608 266 395 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.154 3.33e-88 261