Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele46g0587 | ATGCCTACGCGTTACAACCTCGATGTGGATCTCAAGGACTTAGTGTCGATCGATTCTCTTCAATCGAAGGACAAGAAGGTGACATCCTTGAAGGAGACGAAGAAGAGGTTTGAGGAGAGGTTCAAGACCGGCAAGAACAGGTGGTTCTTCACTAAGCTTAGGATTACAGAACTGCTTTTACAAGTTATTTTGAACAATTTGTGA | 204 | 0.4314 | MPTRYNLDVDLKDLVSIDSLQSKDKKVTSLKETKKRFEERFKTGKNRWFFTKLRITELLLQVILNNL | 67 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele46g0587 | 67 | PANTHER | 60S RIBOSOMAL PROTEIN L27 | 1 | 55 | IPR001141 | GO:0003735|GO:0005840|GO:0006412 | |
| Lele46g0587 | 67 | Gene3D | - | 1 | 55 | IPR038655 | - | |
| Lele46g0587 | 67 | Coils | Coil | 20 | 40 | - | - | |
| Lele46g0587 | 67 | Pfam | Ribosomal L27e protein family | 1 | 54 | IPR001141 | GO:0003735|GO:0005840|GO:0006412 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele46g0587 | Lele-ChrLele46 | 4147198 | 4147807 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele46g0587 | 1 | 54 | Cytoplasmic Ribosomal Protein Gene Family | AT2G32220 | 77.778 | 4.54e-27 | 93.6 |