Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0530 ATGGCGGGTACGGCTGCAAACTACTTGTTTCTTGTGGACTACGTTGACAGAGGGAAGCAAAGCTTGGAGACTGTATGTTTGCTTTTGGCCTACAAAGTAAGATATCCTGACAAAATTCATCTCCTGAGAGGAAACCATGAAGAAGCTAAGATAAACCGGGTATATGGGTTTTACGATGAATGTAAAAGGAGGTTCGATGTTCAGTTGTGGAAGATATTTACTGACTGCTTTAACTGTCTCCCCGTAGCTGCACTTATTGGTGGCAAAATTCTTTGTATGCACGGTGGTCTCTCTCCAGAATTGCAAAATTTGGATCAGATAAAGGAGATATCAAGACCTACCGAAGTTCCTGATTGTGGTCTCCTCTGTGATCTCCTCTGGTCTGATCCTGATCCCACTATCGAGGGCTGGGCAGACAGTGACCGGGGGGTGTCCTGTACTTTTGGCCCTGATGCCCTCAAAGACTTTATGGATAAGAATGATATTGACCTCATTTGCAGAGGTCATCAGGTGGTGGAGGATGGATACGAGTTTTTTGCTAAAAAAAGTTTAGTGACATTATTTTCTGCTCCAAACTACGGTGGGGAGTTTGATAATGCTGGTGCCTTGTTGAGCGTTGATGAGAATCTAAAAGTTTCAGACTTTTTGGACAGAGTTATCCTTCTTTTCTTGCCCTGGGACTCGATAATGTGGCAGAATCATCCCCATAAATCTTCTCCTTCTTCTTGTTTAAGAGATTCTATTGTGGCTCTTGAAGCTGATATTCAACATGCCAATACCCTGTGA 786 0.4326 MAGTAANYLFLVDYVDRGKQSLETVCLLLAYKVRYPDKIHLLRGNHEEAKINRVYGFYDECKRRFDVQLWKIFTDCFNCLPVAALIGGKILCMHGGLSPELQNLDQIKEISRPTEVPDCGLLCDLLWSDPDPTIEGWADSDRGVSCTFGPDALKDFMDKNDIDLICRGHQVVEDGYEFFAKKSLVTLFSAPNYGGEFDNAGALLSVDENLKVSDFLDRVILLFLPWDSIMWQNHPHKSSPSSCLRDSIVALEADIQHANTL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0530 261 Gene3D - 3 225 IPR029052 -
Lele46g0530 261 PRINTS Serine/threonine phosphatase family signature 104 131 IPR006186 GO:0016787
Lele46g0530 261 PRINTS Serine/threonine phosphatase family signature 161 181 IPR006186 GO:0016787
Lele46g0530 261 PRINTS Serine/threonine phosphatase family signature 41 65 IPR006186 GO:0016787
Lele46g0530 261 PRINTS Serine/threonine phosphatase family signature 183 199 IPR006186 GO:0016787
Lele46g0530 261 PRINTS Serine/threonine phosphatase family signature 8 35 IPR006186 GO:0016787
Lele46g0530 261 PRINTS Serine/threonine phosphatase family signature 75 101 IPR006186 GO:0016787
Lele46g0530 261 ProSitePatterns Serine/threonine specific protein phosphatases signature. 42 47 IPR006186 GO:0016787
Lele46g0530 261 SMART pp2a_7 1 221 IPR006186 GO:0016787
Lele46g0530 261 SUPERFAMILY Metallo-dependent phosphatases 7 213 IPR029052 -
Lele46g0530 261 FunFam Serine/threonine-protein phosphatase 2 218 - -
Lele46g0530 261 Pfam Calcineurin-like phosphoesterase 7 171 IPR004843 GO:0016787
Lele46g0530 261 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0530 Lele-ChrLele46 3684508 3686759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0530 8 167 Calmodulin-binding Proteins AT5G63870 30.928 2.96e-24 97.1