Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0529 ATGAGTAATAACGCGTTATCTTCTCGACGCGATGCTTTCCCGGCCGGTCTCCGAGTTCTTGTCGTCGACGACGACTTGACGTGGCTCAGGATTCTTGAGAAGATGCTGAAGAAGTGCTCTTACGAAGTGACCACATGTTGTTTAGCAAGAGAGGCTCTAAATTTGCTTCGTGAAAGGAAAGATGGATATGACATTGTGATAAGCGATGTAAATATGCCGGACATGGATGGTTTTAAACTTCTCGAGCATGTCGGACTTGAGATGGATCTTCCTGTGATCATGATGTCTGTGGATGGAGAAACAAGGAGGGTGATGAAGGGAGTTCAGCATGGAGCATGTGATTACCTCCTCAAGCCTATAAGGATGAAAGAGCTGAGAAATATATGGCAACACGTGTTCAGAAAAAGGATGCGCGAGGCAAGAGAATTTGGAAGTCTTAAGGGTTTTGAGGGATTTCAATTAATGAGAAATGGAGCAGATCAGTTTGATGAAGGGAACTTATTTGCTATAGAAGATATGACCCCAACGAAGAAAAGAAAAAACCCAGATAGCAAACGTGATAACAGGGAATTTGGAGATCAATCTTCCACAAAGAAAGCCAGAGTAGTTTGGTCTGTGGATCTTCATCAGAAATTTGTCAAGGCTGTGAATCAGCTTGGATTTGATAAAGTTGGCCCCAAGAAAATACTTGATTTGATGAATAAATACCGGCTCTATTTGAGTAGGTTGCAGAAGGATGGAGATAAAAATTCTTCCACAAGTGGGATTCAACATTCTTCCTCAAGTGGGATTCAGCATTCGGATTTAGTTTCGAAAGATCCTGCAGGAAGTTTCTCTTTTCAGAACCCAACAGACAGGCAACAAAATGATGTTTCAATTGACAGCCAAAGATATTCAGATGGAACGTTACAACTTCAGAATGTGGATGCCAGAAGTCATGAAACTAATCTCAAGGGAATAATCTCAGAGGCTTCCATGGATAAAAGAACAGAAATGACTACCAACTTTCAACATACAAATATAAGAAAGAGTGCACAGAAGATCAATGATCAGTCTTTTGCACCTCCAAATTCAGAAGTAAGCCACGCAGCAGCATTTGAGTGCACCAACCCTTGGAGGGAAATCCCAGAAATGCAACTCAAAAAACATCAGCCATATCTTCCAATGAAGGATCGCTTCAGCCACTTACCATTACATGGTACAGAGCATCATATCCAGGTTGATCAATCACAAGCAGATGCTTCAATTAGATCCGACCCATCATCCGTAGTAATGGAGAGTGAAACTGCTGCCCGTATTGAAACCAACCCTTCGTATGCTGATTACACCAACGATTGCGCCGGTTCTGTTAGTTCCATAGGAAGTGCTGGTGGCTTTTCTATGCAGTCCGAGAGTTTTATGGGGAACGATCAATCTTTAGAACCAGTTTCTGTTTCAAATTTGGGCAGGATAACAGAGGGGTTTAATCTGAACTCTGTTTCTGACCTGGAATTTCACCGAAGAAACCTACTTTTAGAAGGCGAGTTCGCTTCTTCTGCACCTTTGGAGGAGGAATTGAAATCGTTTTGGCTACAAGGTGAACGCTGTGTGAACTCTGGACTGCAGAATATAGAGATGCCAGATTATTATTATGATCCAGGACTAACTGGGGAAGTTCCAATTCATTTGTTTGATTCAGCTGAATATTCAGCAGTAGATCAAGGCCTTTTCATAGCATGA 1719 0.42 MSNNALSSRRDAFPAGLRVLVVDDDLTWLRILEKMLKKCSYEVTTCCLAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETRRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMREAREFGSLKGFEGFQLMRNGADQFDEGNLFAIEDMTPTKKRKNPDSKRDNREFGDQSSTKKARVVWSVDLHQKFVKAVNQLGFDKVGPKKILDLMNKYRLYLSRLQKDGDKNSSTSGIQHSSSSGIQHSDLVSKDPAGSFSFQNPTDRQQNDVSIDSQRYSDGTLQLQNVDARSHETNLKGIISEASMDKRTEMTTNFQHTNIRKSAQKINDQSFAPPNSEVSHAAAFECTNPWREIPEMQLKKHQPYLPMKDRFSHLPLHGTEHHIQVDQSQADASIRSDPSSVVMESETAARIETNPSYADYTNDCAGSVSSIGSAGGFSMQSESFMGNDQSLEPVSVSNLGRITEGFNLNSVSDLEFHRRNLLLEGEFASSAPLEEELKSFWLQGERCVNSGLQNIEMPDYYYDPGLTGEVPIHLFDSAEYSAVDQGLFIA 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0529 572 Gene3D - 195 245 - -
Lele46g0529 572 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Lele46g0529 572 Gene3D - 17 176 - -
Lele46g0529 572 MobiDBLite consensus disorder prediction 173 194 - -
Lele46g0529 572 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 245 IPR045279 GO:0009736
Lele46g0529 572 MobiDBLite consensus disorder prediction 247 292 - -
Lele46g0529 572 MobiDBLite consensus disorder prediction 171 194 - -
Lele46g0529 572 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 199 237 IPR006447 GO:0003677
Lele46g0529 572 CDD REC_typeB_ARR-like 19 133 - -
Lele46g0529 572 SUPERFAMILY Homeodomain-like 197 239 IPR009057 -
Lele46g0529 572 PIRSF RR_ARR_type-B 1 545 IPR017053 GO:0003677|GO:0003700|GO:0009736
Lele46g0529 572 SMART REC_2 17 129 IPR001789 GO:0000160
Lele46g0529 572 SUPERFAMILY CheY-like 16 140 IPR011006 -
Lele46g0529 572 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0529 Lele-ChrLele46 3656797 3661982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0529 8 234 Response Regulator Gene Family AT4G16110 56.485 5.29e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele46g0529 Response_reg 1.7e-23 CL0304