Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0520 ATGTATTTATCGGAGAAACCCCGACCCATTGATTTCTACAAAGAAGAAGCAACCCCAGATATGATGATCGAGGTTGCGTCCAATGCCGAACTTCCTCCTCCTCCGCTGCCACTTCAACAACTTCCGCAACATCAAATGATCCTCGGCGAAAGTAGCGGCGAGGACCATGAGGTTGAAATTAAGGCGCCAAAGAAGCGCGCTGAGACTTGGGTACAAGACGAAACGCGAAATCTCATTGCTTTTCGACGTGAGATGGATGGGCTGTTTAATACCTCCAAATCTAATAAGCACTTGTGGGAACAGATATCGGCGAAGATGAGAGATAAGGGATTTGATCGATCGCCGACTATGTGTACGGATAAGTGGAGAAATCTGCTAAAGGAATTCAAGAAGGCGAAGCATCAAGATAGAGGAGCTGGGTCCGCTAAGATGTCGTATTACAAAGACATTGAAGAGATTTTGAAAGAGAGGAGCAAGAGTGTTTGCTACAAGAGCCCTACTCCTCCAAAGGTTGAATCCTATATGCAATTCTCTGATAAAGGTGTGGAGGATACCAGCATTTCTTTTGGGCCTGTTGAAGGTTCAGCCACTGGCAGATCAACACTCAATCTTGAAAACCGTTTGGATCATGATGAACATCCTCTTGCAATTACTGCAGCTGATACTGGTTGCACAAGTGAAGTTCCTCCTTGGAGTTGGAGAGAAACTCCTATAAGCGGTGGGGAAGGTCAGTCATGTTGTGGGAGGGTCATAACAGTCAAATGGGGTGATTACACAAGAAGAATAGGCATTGATGGTACTTCAGAAGCCATCAAAGAGGCAATAAGAGCTGCTTTTAGGTTGAGAACCAAACGTTTGTTTTGGTTGGAGGATGAATACCAGATAGTAAGGAGTCTTGACCGAGATATGCCTGTAGGAAATTATACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTCTATGATGAGTCTGACCAAATTCATGTTCATACTGAAGAGAAGATCTTTTACACCGAAGAAGATCACCGTGATTTTCTGGCCCGGCGGGGCTGGACATGTCTGAGGGAACTTGATGGATATAGAAACATCGATAACTTGGATGATCTTCAACCTGGTGTCATGTACCGTGGTGTGAGTTGA 1146 0.4476 MYLSEKPRPIDFYKEEATPDMMIEVASNAELPPPPLPLQQLPQHQMILGESSGEDHEVEIKAPKKRAETWVQDETRNLIAFRREMDGLFNTSKSNKHLWEQISAKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGAGSAKMSYYKDIEEILKERSKSVCYKSPTPPKVESYMQFSDKGVEDTSISFGPVEGSATGRSTLNLENRLDHDEHPLAITAADTGCTSEVPPWSWRETPISGGEGQSCCGRVITVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRTKRLFWLEDEYQIVRSLDRDMPVGNYTLHLDEGMAIKVCLYDESDQIHVHTEEKIFYTEEDHRDFLARRGWTCLRELDGYRNIDNLDDLQPGVMYRGVS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0520 381 FunFam trihelix transcription factor GT-1 70 132 - -
Lele46g0520 381 Gene3D - 70 132 - -
Lele46g0520 381 CDD GT1 68 133 - -
Lele46g0520 381 SMART sant 66 128 IPR001005 -
Lele46g0520 381 Pfam Myb/SANT-like DNA-binding domain 69 153 IPR044822 -
Lele46g0520 381 PANTHER FI21293P1 49 356 - -
Lele46g0520 381 ProSiteProfiles Myb-like domain profile. 62 126 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0520 Lele-ChrLele46 3585945 3589684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0520 20 380 Trihelix Transcription Factor Family AT3G25990 68.280 4.79e-177 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele46g0520 Myb_DNA-bind_4 1e-19 CL0123