Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0511 ATGGCTGCTGGGAGGCATGGAGGCTATCGCGACAACGAATTTAGGGATTGTGAGTCCAGTTTTGAAGTCTCAAGGCGGGGTTATGCTTCTGAGGAAGATTACGATCGGATTAGGCCTAGTAGCCGCGATGGTGTGAGAGGTGGGAACACGGGTTCAAGAGACAGTATTAGATTGAGACAGAATGATATAAGGGAGAGAGAGGCGATGAATGGCAGCTACCACTCATCTTCAAGTAGGAGTAACTCGGGGAGCAGCAGTGGTGGTCTGGGTCCCAGAAAATGTGGTTTTTCTGTCAAGGCAACGGATAGGGAGCCAGGTGAGCTTTCCAGCGACAGCGGCTCTGATGAAGCTATTGAATCAGAACCACAGGGGAAAGGCTTTGAGGTTGCGAAGGTTGAAAAAAATGGGACTCAGTCTCCATTGGAGAGGAAAAGAAAATTTTCACCTATAGTGTGGGATCAGGATGACAAAGAAGTCAATGTTTCATCCAAACTTAAGGTGTCCACAACTTCGAGTACTCTTCCTCCTCCACCACCGTTACCAAAATCATTCCGTCAGTCGCCTAACGCTCCATATGGTGGAGTGGAGATACATCCCGTGAACAAAAGAGAAACTGAGAGTCTTGAGGTGCCTACAGCAGTTAAACCTCCTCTGTCCCCTGAGTCAGTTCAGGATGTTGATACTGAGTCTACTGAGAGAGCGCTTCCTTTGTCACCTGATCAAAATTTGGGCTATGATCAGGAGGCTGAGCAGCCAGAGGGTGATTTCTATGTGCCTATGCATAATATATCATCTTCAAGATGGGCAGATGGGGATAATTCTCCTGGGGATGAAGGTGAAATTATAGATCATGATGATGAGCTTTCTAAAAAGAAGAGGAGGTTGTCACCTGAGTTATTGAATACCAGAATACGAAACAAGCTATTGAGCCCAGATGAATCAAAAAGAGATGGCTATGAAGGAGCTAGAGCTAAGTCATCTGAATCTGAAGAAAGAGGTAGCCATGGTAAAATCTCCACCGGGGATGATCATACTGTTATTGGATCTGACAAGGATGACTATATGGATATTGATGGTCAAGTTGTCAAAAGGGAAACTATTGTTAGCCACTCAGATACTGCTTCTGAAGATGAAGATGATGGACGGGAGACTCCAGAGCCTCCAACTCCACCACAAAGAGTTGTCAACATGCTCCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATAGATGAAGGGACATATGGTGTTGTATATAGGGCCAAAGATAAGAAGACTGGGGAAATTGTAGCATTGAAGAAGGTAAAGATGGAGAAGGAAAAAGAGGGCTTCCCGCTGACTTCTCTAAGGGAAATAAATATTCTACTTTCTTTTCATCACCCATCAATAGTTGATGTTAAAGAAGTAGTTGTAGGTAGCAACCTTGATAGTATTTTTATGGTGATGGAATACATGGAACATGATCTTAAAGGACTGATGGAGGCAATGAAGCAGCCATTCAGCCAGAGTGAAGTGAAGTGCCTTATGCTCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCTAACCTGCTTTTGAATAATAGGGGTGAGTTAAAAATTTGTGATTATGGGTTGGCTCGTCAGTATGGGAGTCCATTGAAAACATACACGCATCTGGTTGTTACCCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGACAAAACAGTATTCGACAGCCATTGACATGTGGTCTTTGGGTTGCATAATGGCTGAGCTATTGTCCAAAGAGCCATTATTCAACGGGAAGACTGAATTTGATCAAATTGACAAGATCTTCCGTATTCTTGGGACACCAAATGAAACAATTTGGCCTGGGTTCTCTAAATTACCTGGAGTGAAAGTCAATTTTGTCAAGCATCAGCTTCGAACTTTGGGTGGTTCTGGTCGGGCTATCTGGCCCCCCTTGGTGAATTTTAAAGTTACACAACTTTTTCTCTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCTGAGAAGAGGATCACGGCTGATGAAGCTCTCAATCATGAGTGGTTTCGTGAAGTTCCTCTTCCCAAGTCTAAAGAATTCATGCCTACTTTTCCTGCTCGACATGCTCAAGAGAGGCGTACTCGGAGACTAGTAAAGAGTCCTGATCCTTTAGAGGAGCAGCGTCGTAAGGAGTTGCAGCAGGGTGAATTAGGGACTGGTGGTATTTTTGGCTGA 2280 0.4417 MAAGRHGGYRDNEFRDCESSFEVSRRGYASEEDYDRIRPSSRDGVRGGNTGSRDSIRLRQNDIREREAMNGSYHSSSSRSNSGSSSGGLGPRKCGFSVKATDREPGELSSDSGSDEAIESEPQGKGFEVAKVEKNGTQSPLERKRKFSPIVWDQDDKEVNVSSKLKVSTTSSTLPPPPPLPKSFRQSPNAPYGGVEIHPVNKRETESLEVPTAVKPPLSPESVQDVDTESTERALPLSPDQNLGYDQEAEQPEGDFYVPMHNISSSRWADGDNSPGDEGEIIDHDDELSKKKRRLSPELLNTRIRNKLLSPDESKRDGYEGARAKSSESEERGSHGKISTGDDHTVIGSDKDDYMDIDGQVVKRETIVSHSDTASEDEDDGRETPEPPTPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSNLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDYGLARQYGSPLKTYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQIDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQLRTLGGSGRAIWPPLVNFKVTQLFLSDSGFDLLNKLLTYDPEKRITADEALNHEWFREVPLPKSKEFMPTFPARHAQERRTRRLVKSPDPLEEQRRKELQQGELGTGGIFG 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0511 759 MobiDBLite consensus disorder prediction 308 350 - -
Lele46g0511 759 FunFam cyclin-dependent kinase G-2 isoform X1 392 489 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 70 88 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 8 42 - -
Lele46g0511 759 PANTHER CELL DIVISION PROTEIN KINASE 405 710 - -
Lele46g0511 759 ProSiteProfiles Protein kinase domain profile. 407 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0511 759 MobiDBLite consensus disorder prediction 364 393 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 273 300 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 722 748 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 223 237 - -
Lele46g0511 759 FunFam Cyclin-dependent kinase G-2 490 735 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 1 350 - -
Lele46g0511 759 CDD STKc_CDC2L1 401 704 IPR045267 GO:0004674|GO:0005524|GO:0006468
Lele46g0511 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Lele46g0511 759 Gene3D Transferase(Phosphotransferase) domain 1 490 736 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 722 759 - -
Lele46g0511 759 MobiDBLite consensus disorder prediction 137 162 - -
Lele46g0511 759 SUPERFAMILY Protein kinase-like (PK-like) 399 710 IPR011009 -
Lele46g0511 759 Pfam Protein kinase domain 407 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0511 759 Gene3D Phosphorylase Kinase; domain 1 392 489 - -
Lele46g0511 759 SMART serkin_6 407 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0511 Lele-ChrLele46 3528769 3531719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0511 398 752 Core Cell Cycle Gene Families AT5G10270 43.817 1.16e-94 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Lele46g0511 Pkinase 3.6e-75 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g0511 46 3528769 3531719 Lele46g0511 46 3528769 3531719 ECH
Lele46g0511 46 3528769 3531719 Lele47g0914 47 15302192 15309028 hybridization
Lele46g0511 46 3528769 3531719 Lele48g0978 48 14863685 14866629 hybridization