Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0484 ATGTCTTACAAGTGTATCTCTTCGTTCAGTGTATGCATGCAACGAGGAGATGCAATGTTTCGGTTGAAGAGGCATGTCTTACAGGTGTATCTCTTCGTTCAGTGTATGCATGTGCCTATAAATACCGCAGTGCCGACGGTGCTAAAGTCAACAGCCAAAACTCTATTTGAAGCCATCATATTCTTCTTCGTAATGCACCCTTTCGACGTTGGAGATCGCTGTGTCATCGATGGCATACAGAACTCGTTGCCCCACCTACAAGAAGAAGCAACAAGAGGTAACTCATCAATGGCTTCTACTTCTGCAGTTTCCATGGCCATGCCACCAGCTTGCGCCGCCGCCCAGAAGAAGGCGGCGCCACTCACCTCCTCATTCTTCCAGCCACTGCCTCTCCGACCTTCCAACAAGGTCATCGTATCCAGTCCCAGTTCCAGGCTTGTAGTGAGGGCCTCCCTTAAGGAGAAGGCTGTCACAGGTCTCGCCGCAGCCGCTTTGACGGCTTCCATGATGGTCCCCGATGTGGCTGAAGCCGCCGTCTCGCCGTCTCTCAAGAACTTCTTACTCAGCATCGCCGCCGGTGGGGTCGTGCTCGCCGCCATTGTTGGCGCCGTCATCGGTGTTGCCAACTTCGATCCCGTCAAGCGAAGCTAA 651 0.533 MSYKCISSFSVCMQRGDAMFRLKRHVLQVYLFVQCMHVPINTAVPTVLKSTAKTLFEAIIFFFVMHPFDVGDRCVIDGIQNSLPHLQEEATRGNSSMASTSAVSMAMPPACAAAQKKAAPLTSSFFQPLPLRPSNKVIVSSPSSRLVVRASLKEKAVTGLAAAALTASMMVPDVAEAAVSPSLKNFLLSIAAGGVVLAAIVGAVIGVANFDPVKRS 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0484 216 PANTHER OS07G0673550 PROTEIN 97 216 - -
Lele46g0484 216 Pfam Photosystem II reaction centre X protein (PsbX) 179 216 IPR009518 GO:0009523|GO:0015979|GO:0016020
Lele46g0484 216 Gene3D Single helix bin 178 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0484 Lele-ChrLele46 3299998 3302863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0484 47 80 Mechanosensitive Ion Channel Family AT3G14810 73.529 1.08e-11 61.6