Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0482 ATGTTAATGAGCCATATCTTGAAATTTCCCCATCTTCTTCCTCCAAATTCGGACCAGAAATATCATCAAAACATGCCTCTCTTTTACTATGGCCTTGCAGTCGTAGGAACAGCAGCCGTAATATTAGCAGTTTACAACCTTATCATCATCAAACGGTGCGGCGTTGGCGGCCGCCGCCACACACAATCATCGTCTCCATCGTCTTCTTCTTCTTCTTCATCATTATCTCAGCCTGCAAATCGGGTAACTCATGAAGCAGTGGTACCCATCAATAGGAGTTTTGATATAAGATTGAACAGAAACATGTTACTGTCAAGCTTCAAGTACAAGAAAGAAGCAGAAGAAGGAGACTGTGAATGCCCAGTTTGTCTTTGTGGGTTTGAAGAAGGAGAAGAAGTGAGGAAGTTACCGAGGTGTAAGCATAGGTTTCATGCACTGTGCATAGACATGTGGCTCTTCTCTCACTTCGATTGCCCAATTTGTCGAACACCTGTGCTGCACTTTTGCCAGCTTTTTCCGCCGCCACCGCCGGCGGCGGCGAGTTCTGGTGATGAAGGCTTGCTCCGATCCGCCATTAATGGCGTCGCTGTTTGA 594 0.4646 MLMSHILKFPHLLPPNSDQKYHQNMPLFYYGLAVVGTAAVILAVYNLIIIKRCGVGGRRHTQSSSPSSSSSSSSLSQPANRVTHEAVVPINRSFDIRLNRNMLLSSFKYKKEAEEGDCECPVCLCGFEEGEEVRKLPRCKHRFHALCIDMWLFSHFDCPICRTPVLHFCQLFPPPPPAAASSGDEGLLRSAINGVAV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0482 197 MobiDBLite consensus disorder prediction 60 80 - -
Lele46g0482 197 Pfam Ring finger domain 119 162 IPR001841 -
Lele46g0482 197 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 168 IPR013083 -
Lele46g0482 197 SUPERFAMILY RING/U-box 107 174 - -
Lele46g0482 197 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 19 165 IPR044675 -
Lele46g0482 197 SMART ring_2 120 161 IPR001841 -
Lele46g0482 197 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0482 Lele-ChrLele46 3289500 3290501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0482 32 165 C3H Transcription Factor Family AT5G17600 37.410 1.70e-17 77.4