Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0475 ATGGCCATCTTCTTCCTTCCTCCTCATACTATATTTCTAGCACTCATTTTCTTTTCCAACTCCATTATTGCAGCTCAATCGCGAACCGACAGTGGAACGGACTTCTCATGCCTTGCTGATTCACCACCTTCCTGTGAAACGTATGTATCATACTATGCCCAGTCTCCAAAATATTTGAGTCTAGTGAACATATCTGATGTATTTGGGATCAGTCCTTTATCCATTGCAAGAGCTAGTAACTTATCAGATGAAGATAATAAGCTGGTTCCGGGCCAGCTCTTACTGGTTCCTGTGACTTGTGGTTGCACTGGAAACCGCTCTTTCGCCAATATAACCTACGAGATCAAGTCAGGTGATAGCTACTACCTTGTTTCATACACTGCATTTGAGAATCTCACAAATTATCATGTAGTGGAAGAGTTTAACCCCGGTCGGAATCCAAATCTTTTGACTGGAGGCACCAAAATAGTCTTCCCTTTGTTCTGCAGGTGCCCTTCAAGAAGTCATTTGGCCAAAGGCATAAAGTTTTTGATAACGTATGTTTGGCAACCTAGTGACAATGTTACTGTCGTTAGTACCAAGTTTAATGCATTTGAAATGGACATAATGACAGAAAACAAATACCAGAACTTCACCTCTGCAGCCAACCTTCCAGTTTTGATCCCGGTGTCGCAGCTTCCAGATGTTTCTCGAGCTTATTCATCATCACAGAGAGAAGGAAACAATAATCTGGTCTATGTTTATTGTCTGAGAAAGAAAAAGATTAGTTTGAAAAAGAATGCTTCATTTATGGAGACAGCAGATAAGCTACTTTCTGGGGTCTCAGGTTATTCTGGAAATTGCTTCTTGGTTTATGAATATGCTGAAAATGGATCTCTTGATATTTGGATGTACTCCATGTCTGCTTCAGAAGCTTCTTCTGGTTCTGGGTCATTTCTCACATGGAGCCAAAGGATATGCATTGCCCTAGACGTGGCTATGGGTTTGGAATACCTGCATGAACACACTCAACCAAGAATAGTCCACAGGGACATCAGAACAAGTAACGTACTTCTTGACTCGAGTTTCAAGGCGAAGATAGCGAACTTCTCGATGGCAAGAACTTCTATGAATCCAATGATGCTGAAAACAGATGTTTTTGCTTTCGGGGTTGTTTTGCTCGATTTGCTCACAGGGAAGAAAAGCATGACGACGAATGAAAAAGGCGAGGTAGTGATGCAGTGGAAGGATATCAGAGGAATCTTTGATGCAGAGGATGAGAAGAAGAAAGAGGAGAGTCTCAGAAAATGGATGGATCCTAGGCTAGGAAGCTTTTATGCCATTGATGATGCTCTAAGCTTGGCCTCCTTGGGAGTGAGTTGCACTGCAGATAAGCCTTTGTCAAGACCAACCATGGCAGAAGTTTTTCTTAGCCTCTCGTTTCTGAGTCAATCAGGTCCTAAAGTCACATTAGAACGACGGACTTCTCGTGGTGGGTTAGATGAAGAAGTTCCTCAAATGAAAAGTCCCATTACAGCTCGTTGA 1524 0.4226 MAIFFLPPHTIFLALIFFSNSIIAAQSRTDSGTDFSCLADSPPSCETYVSYYAQSPKYLSLVNISDVFGISPLSIARASNLSDEDNKLVPGQLLLVPVTCGCTGNRSFANITYEIKSGDSYYLVSYTAFENLTNYHVVEEFNPGRNPNLLTGGTKIVFPLFCRCPSRSHLAKGIKFLITYVWQPSDNVTVVSTKFNAFEMDIMTENKYQNFTSAANLPVLIPVSQLPDVSRAYSSSQREGNNNLVYVYCLRKKKISLKKNASFMETADKLLSGVSGYSGNCFLVYEYAENGSLDIWMYSMSASEASSGSGSFLTWSQRICIALDVAMGLEYLHEHTQPRIVHRDIRTSNVLLDSSFKAKIANFSMARTSMNPMMLKTDVFAFGVVLLDLLTGKKSMTTNEKGEVVMQWKDIRGIFDAEDEKKKEESLRKWMDPRLGSFYAIDDALSLASLGVSCTADKPLSRPTMAEVFLSLSFLSQSGPKVTLERRTSRGGLDEEVPQMKSPITAR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0475 507 MobiDBLite consensus disorder prediction 483 507 - -
Lele46g0475 507 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Lele46g0475 507 ProSiteProfiles Protein kinase domain profile. 135 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele46g0475 507 SMART tyrkin_6 228 475 IPR020635 GO:0004713|GO:0006468
Lele46g0475 507 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 271 478 - -
Lele46g0475 507 ProSiteProfiles LysM domain profile. 50 96 IPR018392 -
Lele46g0475 507 SUPERFAMILY Protein kinase-like (PK-like) 277 474 IPR011009 -
Lele46g0475 507 ProSitePatterns Tyrosine protein kinases specific active-site signature. 340 352 IPR008266 GO:0004672|GO:0006468
Lele46g0475 507 Gene3D Transferase(Phosphotransferase) domain 1 288 371 - -
Lele46g0475 507 Gene3D Transferase(Phosphotransferase) domain 1 372 489 - -
Lele46g0475 507 Pfam Protein tyrosine and serine/threonine kinase 271 371 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0475 Lele-ChrLele46 3233788 3235594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0475 239 478 Receptor kinase-like Gene Family AT3G21630 35.714 6.87e-42 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele46g0475 PK_Tyr_Ser-Thr 4.6e-15 CL0016