Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0451 ATGGTAAGAGCACCGTGCTGCGAGAAAGTGGGATTGAAGAAAGGAAGATGGACGGCTGAAGAAGATAAGATATTGACAGAGTACATTGAACAACATGGCGAAGGCTCCTGGAGGAACTTGCCCAAGAATGCTGGATTGTTGAGGTGTGGGAAGAGTTGCAGACTGAGATGGATAAACTATTTGAGGGCAGACGTGAAGAGAGGAAACATTACTCCTGAAGAAGAAGAAATCATCGTAAAGTTGCATGCTGCTCTCGGCAACAGGTGGTCTGTGATAGCAGGACATTTACCGGGACGAACAGATAATGAGATAAAGAATTACTGGAACTCTCATTTAAGGAGAAAAATTTACTGCTTCATCAAAACCCTAAAAGAATCCCTACCTTCTGTAAACGACATTGCTGCTTCCTCCAAACGAAGATCTGGTCGGGTTAGGCCCACACAACCCACCATCAAGCCCAACAACCCAACTCCTTTGGCCCAAAATTTGCACTCACACACTAACATAGGCAAGGTGTACGAAAAAATGTCCAAACCAATCCCAAACCCACAAACCTGTGCCAATAATGCAGGTCTTCAAGATGTTGCCATATCGGCTTCTTTATGTACAAGTGATGATAATCTTGAGACCATGGGACCATATCAGTGGCTAGACGATGAGGTAAAGAAGCTGAGTTACATGTTGGAAAATGGGATGTTTATGAACCCAAGTGAGAATTATGTGGAACCAGAAAATGAATTAGAGCTGAGCAGAATTAACATGGTGGGAGGGGATTTGTATGAACTTGTGGGAAAGCAGATAATGGGAGCAAATGATGAGGATGTTATGAGCAGAAACGGTAAAATTAATTCATCAGAGATTTCTGTCTATGATTATCAGTGGCTCGATTGGGATTACAATCAAGAAGATCTTTGTGAAGAAGATAACCTGAATGTTAACTATTTGTGGGGTGATGCAAATGGTAGTGGAGAATTTGGGGGAAGTTTGTGTTCATATTAA 999 0.4214 MVRAPCCEKVGLKKGRWTAEEDKILTEYIEQHGEGSWRNLPKNAGLLRCGKSCRLRWINYLRADVKRGNITPEEEEIIVKLHAALGNRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFIKTLKESLPSVNDIAASSKRRSGRVRPTQPTIKPNNPTPLAQNLHSHTNIGKVYEKMSKPIPNPQTCANNAGLQDVAISASLCTSDDNLETMGPYQWLDDEVKKLSYMLENGMFMNPSENYVEPENELELSRINMVGGDLYELVGKQIMGANDEDVMSRNGKINSSEISVYDYQWLDWDYNQEDLCEEDNLNVNYLWGDANGSGEFGGSLCSY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0451 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele46g0451 332 MobiDBLite consensus disorder prediction 134 163 - -
Lele46g0451 332 FunFam Myb transcription factor 11 67 - -
Lele46g0451 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele46g0451 332 Gene3D - 13 66 - -
Lele46g0451 332 Gene3D - 71 116 - -
Lele46g0451 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele46g0451 332 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 177 - -
Lele46g0451 332 FunFam Myb transcription factor 71 116 - -
Lele46g0451 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele46g0451 332 CDD SANT 71 112 IPR001005 -
Lele46g0451 332 SMART sant 13 63 IPR001005 -
Lele46g0451 332 SMART sant 66 114 IPR001005 -
Lele46g0451 332 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele46g0451 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele46g0451 332 CDD SANT 16 61 IPR001005 -
Lele46g0451 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0451 Lele-ChrLele46 3081075 3082958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0451 1 310 MYB Transcription Factor Family AT5G49330 41.908 3.05e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele46g0451 Myb_DNA-binding 7.2e-14 CL0123