Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0436 ATGTCCACGGGTCATTTTTCGTTGGAAGATCCGATAACAAATATCTTAAGGACTGTTTGCAAGTTCCTTCCTCAAGTGGAAATTCATATTCCTGAGTGCCATGGCTTCACATTGATTGGAAAAGAATGGATTGCCCTGTGTTATCTCAGAATTTTAAACCCACACACAGGCACACATCCATACTCATCTATTGGCATTTCTCAAACTGTTCTTTCGCTTCCGAGAATGGGTTCATCAAACATAAGGGACGTTTTAACAGCGTTTAGTCCTTCGTTAGACTTGTTTGCTGTCAGCGCTGGAGATGGTCGCATCAAGATATGGGATACACTAAATGGTCAAATCCAGACGGAGTTTGCAGATATCACATCAAGTGATGCAACAAATATATATGCAGGATCAATGAAGGGCCATCTTTCAATAGATTATACATGCATGAAGTGGTTGTCTTTGGAAGGAAAGAGAAAAAGGAAACACGCGTCCTCATTGTTAGTACTTGGAACAGGTAGTGGTGACGTGTTGGCACTTGATGTGTCTGCCGGTCAGTTAAATTGGAGAATTGATGACTGCCATCCTGGGGGCGTGAAAGCTGTTTCATCTTCTGCAAATGGATCATGTGTTTATACTGCAGGTGCAGCTGGAATGATTTGCAAAATTGATTGCAAGACAGGAAACCTGTTGGAAAAATTCAAAGCTTCTGCAAAGGCAATATCATCTATGTCTGTTTCTTCAGATGGCAAGATAATAGCTACTGCAGCAGCACAGCTGAAGATTTTGAATTGTTCTGATCACAAAAAGATACAAAAGTTCTTTGGCCATCCTGGATCTGTTCGGTGTCTTGTCTTCACTGAAGATGGGAAATATGTTCTATCCTCTGCTGTTGGTGAAAGATGTGTTGCTGTCTGGAGGATTGATGGGGCAAAAAAGAAGTCAGTTAGTTGTGTTCTTGCAATGGAGCATCCTGCTGTTTTTCTTGATAGCAGGTGCACTCCTAACAGGGAGCTTGACAATGTTGTTGTATGTGTTTTGGCTATCTCAGAAGTTGGTGATTGTTATGTTTGGATTGGAAATAGTATTGAGGAACTACGTGATGTGAAGCCCGCTAAAATATCATTATCTTTGGAAGGCATAGCCTCCAGAAATTACAAGGGTGCATTGCCAGCAATATATGCTGCAAAGTTAGAAAGCATTAACAATCCTACCTCTGGGCAGGTTTTACTTGTTCATGGGTTGCTTGTAAAACCATCATTCCAAAAAATTTCGGTGCAATCAGGCTCAGACATAAAATTAAATTTCTCTGATGATGGTATTCTTCTTCGGCTGAACAGGTCCCTTGTAAAGTCTAGGAAGGCAAAAGAAGTAAAGAAAGTTACTGCACTAGACCGTGCTAATGCGGAGGATGCCTTGCTCCCAATTCCTAAGCTTTTTGATTCTCATGTGCAAGAGAAAGAATTTCAAGACTCTTCAGTCAAGGAGGTTATGGATGATTTGGTTAGAAGTAGTGAATCTGTTTCTATGGAGATTGAAGATGAGATGGCCCAGGGCGAGACTGATGTGATCTGCATGGAGGACAAGATGAGATCTCTGGGGATACTTGATGATGAAAATGATCTTGAATCAAATATCAAATTTAATTCTTCATTGTTGAAGGGTGTTGATCTTGAAGCTACTCTTCCAATGAGAAAGATAAGGGCAACTGTCTTGACTATGGAGCCATCTGAAGCATATACGCTCCTGGAAGTTTTGCTGACTCTTTGGCAATCAAGGTCATCTACCGGCAAGTGTGCCCTTCCGTGGATATATAGCATTTTAGTGATTCATGGTCACTACTTAATTTCTCAGGAAAATGTGACACATATGCTTGATTCCATGGCCAAGATGGCTGGCTCTAGAGGATCTGCAGTTGAGACTTTGTTACAGTTATCAGGTCGTCTGCAATTGGTGAAAACACAGATTAAAAAAGCTTCTAAAAATACAACTCATTCAGTGAGAAATCCTCAAATGGAAGAAAGCGAAGATGAGGACAGAGAAGATTATATTGAAGAGGAAGGAGATGATGCATCTGAAATAAGTAGTGATGATGATGACAGTTAG 2091 0.4075 MSTGHFSLEDPITNILRTVCKFLPQVEIHIPECHGFTLIGKEWIALCYLRILNPHTGTHPYSSIGISQTVLSLPRMGSSNIRDVLTAFSPSLDLFAVSAGDGRIKIWDTLNGQIQTEFADITSSDATNIYAGSMKGHLSIDYTCMKWLSLEGKRKRKHASSLLVLGTGSGDVLALDVSAGQLNWRIDDCHPGGVKAVSSSANGSCVYTAGAAGMICKIDCKTGNLLEKFKASAKAISSMSVSSDGKIIATAAAQLKILNCSDHKKIQKFFGHPGSVRCLVFTEDGKYVLSSAVGERCVAVWRIDGAKKKSVSCVLAMEHPAVFLDSRCTPNRELDNVVVCVLAISEVGDCYVWIGNSIEELRDVKPAKISLSLEGIASRNYKGALPAIYAAKLESINNPTSGQVLLVHGLLVKPSFQKISVQSGSDIKLNFSDDGILLRLNRSLVKSRKAKEVKKVTALDRANAEDALLPIPKLFDSHVQEKEFQDSSVKEVMDDLVRSSESVSMEIEDEMAQGETDVICMEDKMRSLGILDDENDLESNIKFNSSLLKGVDLEATLPMRKIRATVLTMEPSEAYTLLEVLLTLWQSRSSTGKCALPWIYSILVIHGHYLISQENVTHMLDSMAKMAGSRGSAVETLLQLSGRLQLVKTQIKKASKNTTHSVRNPQMEESEDEDREDYIEEEGDDASEISSDDDDS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0436 696 Gene3D - 215 353 IPR015943 GO:0005515
Lele46g0436 696 Gene3D - 25 214 IPR015943 GO:0005515
Lele46g0436 696 ProSiteProfiles Trp-Asp (WD) repeats profile. 87 117 IPR001680 GO:0005515
Lele46g0436 696 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 84 307 IPR011047 -
Lele46g0436 696 Pfam Dip2/Utp12 Family 558 648 IPR007148 -
Lele46g0436 696 MobiDBLite consensus disorder prediction 670 696 - -
Lele46g0436 696 SMART WD40_4 66 108 IPR001680 GO:0005515
Lele46g0436 696 SMART WD40_4 262 302 IPR001680 GO:0005515
Lele46g0436 696 SMART WD40_4 179 219 IPR001680 GO:0005515
Lele46g0436 696 SMART WD40_4 222 259 IPR001680 GO:0005515
Lele46g0436 696 PANTHER OS03G0300300 PROTEIN 78 695 - -
Lele46g0436 696 MobiDBLite consensus disorder prediction 652 696 - -
Lele46g0436 696 Pfam WD domain, G-beta repeat 266 301 IPR001680 GO:0005515
Lele46g0436 696 Pfam WD domain, G-beta repeat 79 108 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0436 Lele-ChrLele46 2955383 2963830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0436 190 301 U-box Gene Family AT2G33340 26.724 6.74e-06 47.4