Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele46g0428 ATGAATTCGAATTATGGCAAACCCAATCAAACGAGTGCTTCGTCTGCCTCACTGAAGAACTTCAATTTCGACTTTGATCTTGGGGTCGGATCCAATCGACCCAAATCTCTGAACGATCAGAAAACCCAGAAATCGTCCCATCCATATTCTTCTTCCTCTTATTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCATATTCATCCGCGCAACCCAGACCCTCATGGCAACCCAACAAGCCATCATGGACTCACCAGCCTGCACCGAATCTGGTGAATCAGTCTGGATTGCCGGGTGGACCCACCTCCATGGTGGGGGATATCTTTGGCAAGAGCTGGGGATCTACACAACCTTCGGGTTCTAGTTCGACCGTCGGAGTTGTTAATAAAAACCCTAATCTCTTTGGAGATTTGGTGAGCTCTGCAATGGGACAGAATTCTAATAGTAGCGTTAATACTCCTATAAATTCGATTCCTGTTTCTAAGGATTCAAGTACTATATCGAACAAGAGCTCCTTTTCGATGGGAAATATGGCGGATGCTTTGCCTAAAACTAGCAACACGACGACAAATAGTGGAAGTTGGGGATCTTCGAGTTACAATAATACTAGTATGAGCGCTAATAAGAGCTCAAATCTTGGTCGTCCTTCAATGCGAAGTATGAATAGTGGTAGTTCAGCTGGGAGTGGAATGAATGTTAATAGAGATCCATTTAGCTCTTTGGCTGGATTTGGATCAAAACCGTCTGGTAGTCTTAATTCAGCTGGGATGGCCACAATAAATAATAAAGCAGAGGATAATGTTTTTGGAGATTTCCAGAATGCTTCCAGACTAGGCTCTACCACATTCCCATCGAGTAGCTCTACCGCAGATAATATCAGTTTTACAGGAGGATCTACCAATTTGAATCAGAAACCTATGAAGACATCTGCTGGTGGTGACCCTATAGACATGTTTTTCTCATCTTCCTCGGCTTCGGCTGGAAGTGCTACTGTGACTTCAGAAGGATTTGGAGGAAAATCATCTTCTGACATTGATGATTGGGGTTTGGATTCTGCATTTGGTGGAGGAGGAGGACATGATGTGGGTGGTACAACAACTGAGCTTGAAGGGCTTCCACCTCCTCCTGCTGGGCTATCGGGTTCTTCAGCAAAAGGTAAAGGGATGGACAATTACAAGCAAGGTCAATTTGCAGATGCTATTAAGTGGCTGTCTTGGGCTGCCATCGTTCTTGAGAAAACAGATGATAATGCGGGTATGACAGAGGTGTTGTCATGCAGAGCATCATGTTACAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCCGATTGTACAAAGGTGCTAGAAAACGATGACACAAATGTATCTATATTGGTGCAACGTGCTCTCTTGTATGAGAGCATGGAAAAGTACAAGCTTGGTGCGGAGGACCTGAGGACTGTTCTAAAGATTGATCCTGGTAATAGGGTTGCAAGAAGTACAATTCATCGGCTGACAAAACTGGCTGACTAG 1509 0.44 MNSNYGKPNQTSASSASLKNFNFDFDLGVGSNRPKSLNDQKTQKSSHPYSSSSYSPSSSSSSSSSYSSAQPRPSWQPNKPSWTHQPAPNLVNQSGLPGGPTSMVGDIFGKSWGSTQPSGSSSTVGVVNKNPNLFGDLVSSAMGQNSNSSVNTPINSIPVSKDSSTISNKSSFSMGNMADALPKTSNTTTNSGSWGSSSYNNTSMSANKSSNLGRPSMRSMNSGSSAGSGMNVNRDPFSSLAGFGSKPSGSLNSAGMATINNKAEDNVFGDFQNASRLGSTTFPSSSSTADNISFTGGSTNLNQKPMKTSAGGDPIDMFFSSSSASAGSATVTSEGFGGKSSSDIDDWGLDSAFGGGGGHDVGGTTTELEGLPPPPAGLSGSSAKGKGMDNYKQGQFADAIKWLSWAAIVLEKTDDNAGMTEVLSCRASCYKEVGEYKKAVADCTKVLENDDTNVSILVQRALLYESMEKYKLGAEDLRTVLKIDPGNRVARSTIHRLTKLAD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele46g0428 502 MobiDBLite consensus disorder prediction 33 99 - -
Lele46g0428 502 MobiDBLite consensus disorder prediction 23 233 - -
Lele46g0428 502 Gene3D Tetratricopeptide repeat domain 380 501 IPR011990 GO:0005515
Lele46g0428 502 MobiDBLite consensus disorder prediction 355 384 - -
Lele46g0428 502 MobiDBLite consensus disorder prediction 279 307 - -
Lele46g0428 502 Pfam Tetratricopeptide repeat 456 486 IPR019734 GO:0005515
Lele46g0428 502 MobiDBLite consensus disorder prediction 108 233 - -
Lele46g0428 502 SUPERFAMILY TPR-like 384 494 IPR011990 GO:0005515
Lele46g0428 502 MobiDBLite consensus disorder prediction 279 315 - -
Lele46g0428 502 PANTHER OS03G0340700 PROTEIN 1 502 - -
Lele46g0428 502 SMART tpr_5 454 487 IPR019734 GO:0005515
Lele46g0428 502 SMART tpr_5 380 413 IPR019734 GO:0005515
Lele46g0428 502 SMART tpr_5 420 453 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele46g0428 Lele-ChrLele46 2887555 2889536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele46g0428 395 497 Calmodulin-binding Proteins AT3G25230 32.075 5.31e-09 56.6